| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2579 |
|---|
| Symbol | |
|---|
| ID | 4019096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 3088270 |
|---|
| End bp | 3088656 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637956623 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563581 |
|---|
| Protein GI | 91793930 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA TCACTCATGT TTATAACTAC ACAGTCAGAT GCCCACACTA CACAGAGAAT
GAAACCCCGG CAACTTGGCT AAATCATATT GAAGTAAACC AATCTAGTGA AATCGCCCTA
AACCGCATCA CCAAATGGCA CAACTTATCC GGCAGTAAAT CGTTTGAACT TGAAAACTTT
GTTGTCAGAA AAGCCGATGG TGAAGAAGCC TATTTTGCCA TGCAAAGCGA TCGTCTAAAG
CATGATGGCC ATGCCCTAGT GACCTTCAAA ATCTTCCTCG ACCATTGCTG TCACGATGCC
TCTCCTCAAA GCATAATGCA GCACCTTATC AAAGATTATC AACATAGATT AGAAAAAGCC
AACTCACTCG AGGCTATTGC TGTCTAG
|
|---|
| Protein sequence | MTAITHVYNY TVRCPHYTEN ETPATWLNHI EVNQSSEIAL NRITKWHNLS GSKSFELENF
VVRKADGEEA YFAMQSDRLK HDGHALVTFK IFLDHCCHDA SPQSIMQHLI KDYQHRLEKA
NSLEAIAV
|
|---|
| |