| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2574 |
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| Symbol | |
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| ID | 4019091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3079143 |
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| End bp | 3080816 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956618 |
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| Product | L-lactate permease |
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| Protein accession | YP_563576 |
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| Protein GI | 91793925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.231573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTTC TTCAAATACT GGCAAGCTTA ACTCCTGTCA TCAGTGTACT GATATTTTTG
GTATTGATGC GCCTGTCTGC CGCGAAAGCC ATGCCACTCT CCATGCTGAT GACAGGCCTT
AGTGCTTATT TTATTTGGGA AATGGATGCG CTAATGCTAT CGGCTTCAGT GGTCGAAGGC
TTACTGGCGG CGCTTACTCC ATTGAGCATC ATATTTGGTG CTGTGCTGTT ACTCAACACC
TTAAAGCACG CTGGAGCCAT GGACACCATA CGCTCAGGCT TTACTCAGAT AAGTAGTGAC
GCCAGAGTGC AAGTCATCAT AATTTGTTGG TTATTTGGAT CCTTTATCGA AGGCTCAGCA
GGCTTTGGTA CCCCAGCCGC CATTGGCGCG CCATTGCTCC TGCTTTTAGG TGTACCTCCA
ATTGCCGCGG CCGTTGTCGC CCTCATTGCA GATTCAACCT CAGTCTCGTT TGGTGCCATA
GGCTTACCCA TACTCTTTGG CATGGAGCAA GGACTGATGG GGGTTGATGG CAGTATGGCC
GCCGAACAAA TCAGCTTACA TGGCGGCAAT TTTGCCAATT ATGCTCAATA CATTGCCATG
CATATCATCA GCATAGATTT GCTTACTGGT AGCCTGATGC CCTTGTTGCT GTCTTGTCTG
CTAACCGGTT TTTTCGGCAG AAATCACTCA TTCAAAGAAG GCCTATCTAT TTGGAAATTT
GCCTTGTTTT CAGGGTTTGC TTTCACTGTG CCAGCCTGGA GCATTAATTA TCTCGCTGGA
CCTGAATTCC CTTCTGTGAT TGGTGCGCTT ATGGGCATGG CTTTAGTCAT TCCCGTGGCG
AAAAAAGGCT GGCTATTACC AAAAACACCT TGGCATGACT TTGCCGTTAA CCCTGAGCAA
ACAGAACTCA ACCTGATAAG CGCCTCATCG ACATCGCAGT CACTATCTAA TACTAAGCCG
ATATCGCAAC TCGCCGCTTG GTCGCCTTAC CTAGTCATGG CGTTACTCTT AGTCTTATCC
CGCACCTTGA TGCCACTTAA GGCGTGGCTG TCGAGTTTTA CCCTTAGCTG GCAAGGCATA
TTGGGCACTG AGCTTAGCAC TAGCTTCGCC ACCTTATACG CACCTGGGGC ATTTTTTGTG
CTGGTTTGTT TAATGAGTGT TTGGTTGTTT TCCATGAAGG CCAAAGCAAT CAATATGGCC
ATAACTGACT CTTTGAGAGC CATGTTACCG ACGTTAATCG CCTTAGGCGC CAGTGTGCCC
ATGGTGAAAA TATTTTTAAA CTCAGGGGCT AACCACGCAA ATCTGCAATC CATGCCCATC
GCTTTAGCGG ATTTACTGGC GCAAACCATG GGTGGAGTTT GGGCGTGGTT TTCGCCCATA
GTGGGGATTT TCGGTGCGTT TTTATCCGGC TCTGCGACCT TTTCCAATAT GATGTTTGCC
AGTTTGCAAT ATTCGGTGGC CGAACGCATC GGCATGAGTC CTACCCTTGC TCTAGCGCTA
CAGGGCATAG GCTCAAATGC GGGCAATATG ATGTGCGTAA TGAATGTTGT CGCCGCAGCC
ACTGTGGTCG GTATGGCGGA AAAAGAAGCC GATATTATTC GAAAAACCAT GCCGGTAGCA
TTAGCTTATG CCCTCATCGC AGGCACAGTC GCCGCTATTT GGGGCGGCTA CTAG
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| Protein sequence | MSFLQILASL TPVISVLIFL VLMRLSAAKA MPLSMLMTGL SAYFIWEMDA LMLSASVVEG
LLAALTPLSI IFGAVLLLNT LKHAGAMDTI RSGFTQISSD ARVQVIIICW LFGSFIEGSA
GFGTPAAIGA PLLLLLGVPP IAAAVVALIA DSTSVSFGAI GLPILFGMEQ GLMGVDGSMA
AEQISLHGGN FANYAQYIAM HIISIDLLTG SLMPLLLSCL LTGFFGRNHS FKEGLSIWKF
ALFSGFAFTV PAWSINYLAG PEFPSVIGAL MGMALVIPVA KKGWLLPKTP WHDFAVNPEQ
TELNLISASS TSQSLSNTKP ISQLAAWSPY LVMALLLVLS RTLMPLKAWL SSFTLSWQGI
LGTELSTSFA TLYAPGAFFV LVCLMSVWLF SMKAKAINMA ITDSLRAMLP TLIALGASVP
MVKIFLNSGA NHANLQSMPI ALADLLAQTM GGVWAWFSPI VGIFGAFLSG SATFSNMMFA
SLQYSVAERI GMSPTLALAL QGIGSNAGNM MCVMNVVAAA TVVGMAEKEA DIIRKTMPVA
LAYALIAGTV AAIWGGY
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