| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2570 |
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| Symbol | |
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| ID | 4019087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3074551 |
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| End bp | 3075432 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956614 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_563572 |
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| Protein GI | 91793921 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0334175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGCCC AAGCGATTGA ACTATATCAG CAAAGAGTCG ATATCGTACT CAAGAATAAG
CTCGAGCAAC TTGACGACTG CGCCCCTGAA TTGAAAGATG CCATGACCTA CGGCGCCCTC
ATGGGTGGCA AACGTATCAG GCCTTTTTTG GTTTATGCCA TAGGTCAAAT GCTCAAGGTC
CCGCTTGAAA AACTGGACAA TGCCGCCGCC GCCATCGAAT GCATTCACGC CTATTCACTT
ATCCATGATG ATTTACCCGC CATGGATGAT GATGATTTAA GGCGCGGTAA ACCAACCGTA
CATATTGCGT TCAATGAAGC TCAAGCCATT CTTGCTGGCG ATGCGCTGCA ATCACTGGCC
TTTGAGCTCA TGACAGAGAG TCAAGCAGAC ACTAGCCCTA CTCAACAACT GCACATGGTT
AAAGTCTTAG CCAAGGCCGC GGGCTATCAA GGCATGTGCG GCGGGCAAGC CATAGATTTA
GCCGCCACCA ATAAAGCCAT AGATTTAGCC CAACTCACCC AACTGCATAA TAAAAAAACA
GGCGCGTTAA TAAGCTGCGC CGTGGAGTTG GCCATTATTC TAGCCGATGC AAGTCCTGTG
GAACGAGCTC ATCTAGCCCA GTTTTCCCAT GCCTTAGGGT TAGCATTTCA AGTACAAGAT
GACATTTTAG ATGTCACTGT ATCGACTCAA GAATTAGGCA AGCCCCAAGG CAGCGATGAG
CAAGCCAATA AAAGCACCTT TCCTAAATTA TTAGGATTAG CCGCAGCGCA AGCTCAGGCG
ACAGAACTTG TCCAACAGGC ACTATCAGCG CTGGAAGAAT TACCTTACAA TACCCAGTTA
ATTGCAGACT TCGCCAGATA CATCATTACG CGAAGATTAT AA
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| Protein sequence | MLAQAIELYQ QRVDIVLKNK LEQLDDCAPE LKDAMTYGAL MGGKRIRPFL VYAIGQMLKV
PLEKLDNAAA AIECIHAYSL IHDDLPAMDD DDLRRGKPTV HIAFNEAQAI LAGDALQSLA
FELMTESQAD TSPTQQLHMV KVLAKAAGYQ GMCGGQAIDL AATNKAIDLA QLTQLHNKKT
GALISCAVEL AIILADASPV ERAHLAQFSH ALGLAFQVQD DILDVTVSTQ ELGKPQGSDE
QANKSTFPKL LGLAAAQAQA TELVQQALSA LEELPYNTQL IADFARYIIT RRL
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