Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2568 |
Symbol | |
ID | 4019085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3073133 |
End bp | 3073900 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956612 |
Product | flagellar motor protein PomA |
Protein accession | YP_563570 |
Protein GI | 91793919 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.642903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTTAG GAACGCTGAT CGGCATTATA GGTGCTTTTG GATTTATCGT TGGTGCCATG GCCACCAGTG GTGGTGTTGG TTTATTCATC GACGTCGCGT CGGTGCTCAT TGTGGTCGCA GGTTCCGTGT TTGTGGTAAT GATGAAATTC AACCTCAAGC AATTTTTTGG CGCTGTGAGC ATTGGTCTCA AAGCCTTTAT GTTTAAAATT GATAAGCCAG AAGAGCTTAT TGAGCAGTCG GTAAATATGG CCGATGCGGC TCGAAAAGGC GGCTTTCTCG CGTTAGAAGA AGCGCAAATC ACTAACAGCT TTATGCAAAA AGCCGTGGAT ATGCTAGTGG ATGGCCATGA CGGTGAAGTG GTTCGCGCCG CCTTAGAGAA AGACATAGCG CTTACTGAAG AGCGTCATAA AACGGGTATT AGTATTTTTA GGGCCTTTGG TGACGTGGCG CCTGCCATGG GCATGATAGG TACCCTTGTG GGCTTGGTGG CTATGTTATC AAACATGGAT GACCCCAAGT CTATCGGGCC TTCTATGGCG GTGGCCTTGT TAACGACACT TTATGGCGCC ATGATTGCTA ACATGGTCGC CATTCCTATG GCGGATAAAT TGTCGCTGCG CATGGCTGAA GAAATGCTGA ATCGTAACCT GATTATGGAT GCGGTATTGG CGATTCAAGA TGGGCAGAAC CCTAGGGTCA TTGAAGGCTT CTTGAAAAAT TATATTTCTG AGAAAAAACG TAAAGTAGAT ACGACGGACG GGGAGTAA
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Protein sequence | MDLGTLIGII GAFGFIVGAM ATSGGVGLFI DVASVLIVVA GSVFVVMMKF NLKQFFGAVS IGLKAFMFKI DKPEELIEQS VNMADAARKG GFLALEEAQI TNSFMQKAVD MLVDGHDGEV VRAALEKDIA LTEERHKTGI SIFRAFGDVA PAMGMIGTLV GLVAMLSNMD DPKSIGPSMA VALLTTLYGA MIANMVAIPM ADKLSLRMAE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN YISEKKRKVD TTDGE
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