Gene Sden_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2568 
Symbol 
ID4019085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3073133 
End bp3073900 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID637956612 
Productflagellar motor protein PomA 
Protein accessionYP_563570 
Protein GI91793919 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.642903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTAG GAACGCTGAT CGGCATTATA GGTGCTTTTG GATTTATCGT TGGTGCCATG 
GCCACCAGTG GTGGTGTTGG TTTATTCATC GACGTCGCGT CGGTGCTCAT TGTGGTCGCA
GGTTCCGTGT TTGTGGTAAT GATGAAATTC AACCTCAAGC AATTTTTTGG CGCTGTGAGC
ATTGGTCTCA AAGCCTTTAT GTTTAAAATT GATAAGCCAG AAGAGCTTAT TGAGCAGTCG
GTAAATATGG CCGATGCGGC TCGAAAAGGC GGCTTTCTCG CGTTAGAAGA AGCGCAAATC
ACTAACAGCT TTATGCAAAA AGCCGTGGAT ATGCTAGTGG ATGGCCATGA CGGTGAAGTG
GTTCGCGCCG CCTTAGAGAA AGACATAGCG CTTACTGAAG AGCGTCATAA AACGGGTATT
AGTATTTTTA GGGCCTTTGG TGACGTGGCG CCTGCCATGG GCATGATAGG TACCCTTGTG
GGCTTGGTGG CTATGTTATC AAACATGGAT GACCCCAAGT CTATCGGGCC TTCTATGGCG
GTGGCCTTGT TAACGACACT TTATGGCGCC ATGATTGCTA ACATGGTCGC CATTCCTATG
GCGGATAAAT TGTCGCTGCG CATGGCTGAA GAAATGCTGA ATCGTAACCT GATTATGGAT
GCGGTATTGG CGATTCAAGA TGGGCAGAAC CCTAGGGTCA TTGAAGGCTT CTTGAAAAAT
TATATTTCTG AGAAAAAACG TAAAGTAGAT ACGACGGACG GGGAGTAA
 
Protein sequence
MDLGTLIGII GAFGFIVGAM ATSGGVGLFI DVASVLIVVA GSVFVVMMKF NLKQFFGAVS 
IGLKAFMFKI DKPEELIEQS VNMADAARKG GFLALEEAQI TNSFMQKAVD MLVDGHDGEV
VRAALEKDIA LTEERHKTGI SIFRAFGDVA PAMGMIGTLV GLVAMLSNMD DPKSIGPSMA
VALLTTLYGA MIANMVAIPM ADKLSLRMAE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN
YISEKKRKVD TTDGE