| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2563 |
|---|
| Symbol | |
|---|
| ID | 4019080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3068176 |
|---|
| End bp | 3068577 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563565 |
|---|
| Protein GI | 91793914 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2363] Uncharacterized small membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA CTTGGCTTAT GCTTGGCTGT GTTGGGGCGT TTTTGTCTGT GCTATTGGGC
GCATTCGCTG CCCACGGCCT GAAAAAACTG ATATCCATTG ATATGATAAA TATCTTTAGC
ACAGGGGTGG ATTATCAGTT TTACCACAGC TTCGCGCTAT TTATTTGTGC CATTTATGCC
AAAGAATGCC AGCAACAGCC AAAGGCACAG CGCTTTCTTG CCTTGGCGGC CCGTTTTTTT
ATCATGGGCA TAATGCTCTT TAGCGGATCA CTTTATTTAT ATGCACTCAC TGCGCAGAAG
TGGTTAGGGC CAATAACCCC CCTTGGTGGC GTGTGTTTTT TACTGGCTTG GGTTTGCCTT
GGCATTTGCT TTTGGTCAAG CCAAAGCAAG CGTGAAATTT AA
|
|---|
| Protein sequence | MNRTWLMLGC VGAFLSVLLG AFAAHGLKKL ISIDMINIFS TGVDYQFYHS FALFICAIYA
KECQQQPKAQ RFLALAARFF IMGIMLFSGS LYLYALTAQK WLGPITPLGG VCFLLAWVCL
GICFWSSQSK REI
|
|---|
| |