Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2558 |
Symbol | xni |
ID | 4019075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3061326 |
End bp | 3062084 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637956602 |
Product | exonuclease IX |
Protein accession | YP_563560 |
Protein GI | 91793909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAC TACTCATCAT AGATGGACTC AACTTAGTGC GCCGCATACA TGCGGCGCAG CCTGACGAGA ATGACATCAA TAATGTCCAA CAAATGACAT TGCTCGCCTG CACTAAAATG CTCAAGACTC ATCAGCCTTC TCACGTCATA GTGGTCTGGG ATGGCGATGA AGAGTCTTGG CGGAAAAAGC TCTATAGCGA CTACAAAAAA GGGCGAAAGC CTATGCCTGA AGCATTAAAA ATAGCCCTAG TGGGTATACG TAACACACTC AGTGAGGCGG GCATACATTC CCTTGAAGCC GAGTCAGAAG CCGATGATGT TATTGCCACC TTGGCCACTA AAATGGTCGA AAATAGCGGC GCTGCTATTA TCGTTTCAAC AGACAAGGGC TTTAGTCAGC TAGTGAAAAA GAATATTCAA ATTTGGGATC ATTTTAAGCA GCTTTTTTTA GACATTAGCG CCCATGAGAA AAAGCTCGCC GTGGAGCAAT ATCAATTCTT AGACTTTATT GCGCTCGCTG GAGACAGTGG TAATAAAATC CCTGGGATAG CTGGCATAGG GCCCAAATCA GCAGCTGATT TACTCAATAA GTTCAGAACC TTAGCTAATA TTTATAACTC ATTAGATAAT TTAGGTGCCA AGCAAGCCCA GAAACTTGCC GAGGGACGCG AAATGGCCAG AATTAGCTAC AAGCTGGGGC AACTGCAATG CCATATGCCA TTAGAAATTA ATTTGAAACA ATTTAGAGTT AAAAAATAG
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Protein sequence | MNTLLIIDGL NLVRRIHAAQ PDENDINNVQ QMTLLACTKM LKTHQPSHVI VVWDGDEESW RKKLYSDYKK GRKPMPEALK IALVGIRNTL SEAGIHSLEA ESEADDVIAT LATKMVENSG AAIIVSTDKG FSQLVKKNIQ IWDHFKQLFL DISAHEKKLA VEQYQFLDFI ALAGDSGNKI PGIAGIGPKS AADLLNKFRT LANIYNSLDN LGAKQAQKLA EGREMARISY KLGQLQCHMP LEINLKQFRV KK
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