Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2552 |
Symbol | |
ID | 4019069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3051460 |
End bp | 3051945 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637956596 |
Product | glutathione peroxidase |
Protein accession | YP_563554 |
Protein GI | 91793903 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.40006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAATT CTATCTACGA TTTCACAGTC ACAGACATCC AAGGTAACAA CATCAGTATG AGCAGTTTTA AAGGCAAAGT ACTGTTAATT GTTAATACCG CCAGTCAATG CGGTTTTACA CCACAATACA AGGCATTAGA AGAGCTTTAC CAGTCATACT CAGCTAAAGG TTTCGCCGTT CTTGGCTTTC CTTGTAATCA GTTTGGTGCC CAAGAAAAAG AAAACGAAGC CAAGATCAGC CAATTCTGCG AAATAAACTT CGGGGTGAGT TTTCCACTGT TTAGCAAGAT AGAGGTCAAT GGCGCCAATG CGGCACCTTT ATATCAGTAC CTTAAAAATA CGGCCAAGGG AGTGTTAGGC ACAGAAGGCA TAAAGTGGAA TTTCACTAAG TTTCTGGTGG ATGGCGAAGG GAATGTACTG GAACGTTTTG CACCGACCAC CAAACCCGAA ACCTTAGCGC CCAAGATAGC CAAACTGTTA AGTTAA
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Protein sequence | MPNSIYDFTV TDIQGNNISM SSFKGKVLLI VNTASQCGFT PQYKALEELY QSYSAKGFAV LGFPCNQFGA QEKENEAKIS QFCEINFGVS FPLFSKIEVN GANAAPLYQY LKNTAKGVLG TEGIKWNFTK FLVDGEGNVL ERFAPTTKPE TLAPKIAKLL S
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