| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2547 |
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| Symbol | |
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| ID | 4019064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3046573 |
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| End bp | 3047700 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956591 |
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| Product | patatin |
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| Protein accession | YP_563549 |
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| Protein GI | 91793898 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGATT CCATAGCACT CGTTCTAGGC GGCGGCGGCT CCAGAGCCGC TTACCAAATT
GGGGTACTCA AAGCCTTAGC CCAATTCTAT CCCCGCAATC ATGGGGTGCC ATTTAAAATA
ATAAGTGGGA CATCCGCCGG TGCCATCAAT GCTACCTCAT TAGCCACCCA TGCATCCTGT
TTTCATCTTG GAGTGCGTAA ACTTGAGTGG GTATGGCGTA ATTTTGAAAC CCATAAAGTG
TATAAAGCCT CAGTGGCAGG CGTGCTTTCC CATCTAGGAA AAATGGCCAT CAAAGGCTTA
CAGGATGACA AGGTAAATAC AGACGCTGGT AGCCTATTTG ATAATAGTCC GCTGCGAAAT
TTACTCAATC AGTTAATTGA TTTTAAAAGA ATAGACAGAA ACATAGCCAA CAATGCCTTA
ACGGCACTGA GCATAGATGC CTCCTGCTAC AATGATTCCC GCTCCTACAG TTTTTTTCAG
GCCAAAGACA GCATCGACGA TTGGCATAGA TCCCGCCGAA TGGGGTTAAG GGCTCGCCTC
AATACAGATC ATTTACTGGC AAGTTCCGCT ATTCCTTTGG TGTTCCCGTC AATTAAACTT
AACCAAGCCT ATTTTGGCGA TGGCTCAGTG CACCAGCTAT CCCCCTTATC GAGCCCAATT
CATTTAGGCG CTGACAAACT GTTTGTGATC AATTTAGACA GCCCACATAA AGTCAATAAT
TTAGAACTTA AGTATCACCC TAAAACAGCC ACCATAGCAG GCCACCTGTT GGATACGATA
TTTTCAGACA CACTGAACAG TGATTTAGAG CGCCTCACCC GCATCAATAC CACCTTAGGG
TTAATTCCAG AGGAAAATCG CCGCGATCTG AGTCTGCGGC CCATCAAAAC CTTAGTGATC
AAACCCAGCG AAGATTTAAG TCAGATTGCC GCTCGCTTCT ATCAAGATAT GCCCTATGCC
GTTAAGGCCT TGTTAAGGTT AATGGGGCTT GAACGGCAAT CAGATTCCAG TATCGTGTCT
TACTTGTTAT TCGAAAAAAG CTATACCAGT GCCTTGATCA ACTTAGGGTA TAGTGATGCT
ATGGCACAAA TCGATGAGAT TAAATCCTTC TTTAATATCG CTCACTAA
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| Protein sequence | MSDSIALVLG GGGSRAAYQI GVLKALAQFY PRNHGVPFKI ISGTSAGAIN ATSLATHASC
FHLGVRKLEW VWRNFETHKV YKASVAGVLS HLGKMAIKGL QDDKVNTDAG SLFDNSPLRN
LLNQLIDFKR IDRNIANNAL TALSIDASCY NDSRSYSFFQ AKDSIDDWHR SRRMGLRARL
NTDHLLASSA IPLVFPSIKL NQAYFGDGSV HQLSPLSSPI HLGADKLFVI NLDSPHKVNN
LELKYHPKTA TIAGHLLDTI FSDTLNSDLE RLTRINTTLG LIPEENRRDL SLRPIKTLVI
KPSEDLSQIA ARFYQDMPYA VKALLRLMGL ERQSDSSIVS YLLFEKSYTS ALINLGYSDA
MAQIDEIKSF FNIAH
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