Gene Sden_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2543 
Symbol 
ID4019060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3040741 
End bp3041355 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID637956587 
Productacetyltransferase 
Protein accessionYP_563545 
Protein GI91793894 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00567485 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC CTGATTACCA AGCTCAACAC AAACAGCGAT TATCATGGAT GCCTTGGCTG 
TATTTCTCAT TAAAAGATAA GCACTTAGTT TGGGCCAAGC CTTGGCAAGA CCAAATACAG 
TCAACACTTA AACAATTAGA AACTGTCCAC ATAGGTGAGC GATGCTTTAT TGCCCCTGAA 
GCTAAATTGT TCGCAGAACC CGGACGAGAT ATCCATATAG GCAACTTGTG CATGATAGCC 
GCCGATGTGT TTATCCACGG CCCAATTACC TTAGGTGATG AAGTGGCTAT TAATCATGGC 
TGTAGCTTAG ATGGAGGCCG AGCAGGAATA ACCATAGGCA AACAAACACG CATTGCCAAT 
AATGTCACCA TCTATGCCTT TAATCATGGC ATGGCTATGG GCAATCCCAT CTATCAACAA 
ACCGTGTCAT CCAATGGCAT AGTCATAGGT GAGGATGTGT GGATTGGTGC CCAAGCAGGC 
ATAGTGGACG GCGTTACCAT AGGCAATCAT GCTGTGGTTG GTATGGGGGC GATTGTGACA 
AAAAACGTGG CCGATTTTGC CATCGTTGCC GGTAATCCTG CCCGGGTCAT AGGCGATAGG 
CGAGATAAAA CATAA
 
Protein sequence
MEKPDYQAQH KQRLSWMPWL YFSLKDKHLV WAKPWQDQIQ STLKQLETVH IGERCFIAPE 
AKLFAEPGRD IHIGNLCMIA ADVFIHGPIT LGDEVAINHG CSLDGGRAGI TIGKQTRIAN 
NVTIYAFNHG MAMGNPIYQQ TVSSNGIVIG EDVWIGAQAG IVDGVTIGNH AVVGMGAIVT 
KNVADFAIVA GNPARVIGDR RDKT