| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2542 |
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| Symbol | |
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| ID | 4019059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3039957 |
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| End bp | 3040754 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956586 |
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| Product | hypothetical protein |
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| Protein accession | YP_563544 |
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| Protein GI | 91793893 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1720] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00464055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATA TAAACTCAGT ACCAAATACG GTCAAGATTG CACACAAAGA ACCCGTATTT
AGTAATACCA TTAACGCTGT CGCTATTTGC CGCAGCCCCT ACAAACAAAA GTTTGGTATT
CCACGGCAAC CTGGGTTAGT TAATGCAAAG GGTTATATTG AATTAACCTC TGAGGTGAAC
CACTTAGATG CCGTGCGTGG TATTGAGCAG TACTCCCATT TATGGCTATT ATTTTGCTTC
CATGAAAATT TATCCCAAGG CTGGAAAACC ACAGTCAGGC CACCGCGTTT AGGCGGCAAC
GAAAAGTTAG GCGTATTTGC TACCCGCTCC ACCTTCAGGC CCAATGGCAT AGGCCAATCT
GTGGTGCGCC TTCATGGTGT AGTGCAACGC AAAGGTAAAA TATGTTTAGA AATTTCTGGC
ATGGACTTAC TGGACGGCAC GCCTATTATC GATATTAAGC CTTATATCCC CTTCTCCGAT
GCCATTTTTG ACGCCCGCGG CGGCATTGCC CAAGATGCGC CAGAGCTTAT CCCGGTAAGC
TTTTCTTCAC TTGCCGCTAA TCAGCTTGCA CATTTAGGTG CTCAATCCCA GTACGCCGAA
CTTGAAAGTC TCATCATCGG GGTGTTATCC CAAGACCCTC GCCCTGCTTA CAAAAAAACT
AAGCTAGACG CTAAACTATA TCAAGTAGCC CTGTATGATT TAGATATTTT CTGGCACCTA
GTTGACGATA AAATTGAAGT CATAGAGCTT AAACCCACAC GCTTAGGTAA AAGTGAGCCT
GATAATGGAA AAGCCTGA
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| Protein sequence | MTDINSVPNT VKIAHKEPVF SNTINAVAIC RSPYKQKFGI PRQPGLVNAK GYIELTSEVN
HLDAVRGIEQ YSHLWLLFCF HENLSQGWKT TVRPPRLGGN EKLGVFATRS TFRPNGIGQS
VVRLHGVVQR KGKICLEISG MDLLDGTPII DIKPYIPFSD AIFDARGGIA QDAPELIPVS
FSSLAANQLA HLGAQSQYAE LESLIIGVLS QDPRPAYKKT KLDAKLYQVA LYDLDIFWHL
VDDKIEVIEL KPTRLGKSEP DNGKA
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