Gene Sden_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2537 
Symbol 
ID4019054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3034481 
End bp3036055 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content46% 
IMG OID637956581 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_563539 
Protein GI91793888 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0181032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATGA ACCTAATAAC TTATTCTGAT TCCATGCTTT CCTTACTCCC TCCTTTAGTT 
GCCATCATTC TGGCTATTTT CACCCGCCAT GTACTCTTGT CTCTTGGCTT TGGGATCATC
ATTGGTGCCT TATTGCTTAA TGACTTTTCT GTGATGGCCA GCGGTGAATT TGTCGCTAAA
AGCGTCAGTG GCCTAGTGTG GACGGATGGC GGACTTAACA GCTGGAATCT GTACATCATA
GGCTTCCTGA TGGTGCTTGG GATGATCACG GCCTTGATAA CTGTCAGCGG CTCAGCTCGG
GCATTCGCAG AATGGGCAAG GCTGCGCATT AGAAGCAAGC GGGATGCTAA ATTACTGACT
ATCTTCCTAG GTTGTGTGGT GTTTATTGAT GATTATTTTA ACAGCTTAGT CGTAGGTGCA
ATCTCTCGCC CCATTACCGA CCGATATCAT GTGTCTCGAG CTAAACTTGC CTATGTACTG
GACTCGACAG CGGCGCCTGT GTGTGTCTTG TCGCCAATAT CCAGTTGGGG GGCATACATT
ATTGCACTTA TTGGCGGTAT TTTAACGGCT CATGGTTTTG CCGATTCAGG CCATTTAAGC
CTGTTTGTGC AGATGATCCC GATGAACTTC TATGCCATTT TCGCTTTGCT ACTGCTGTTG
TGTGTTGCCA TGTTCGGTCT TGATGTCGGC CCAATGCGCA AACATGAAAT GAATGCCAAG
AAAGGCGAGT TATTTGATGA ATCGAAAGGC ATTCCCGCTG GCGCCATAGC TGAACTGCCT
GAAGCCGATA CCGGCAGTGT ATTAGGCTTG TTTTTGCCTA TTTTGATGTT GGTGTTGGGG
ACTTGCTACT TTATGGTTTC AAGTGGTGCA AACGCGCTCC AGGATGCCAA TATTGAATTT
AGTTTACTGG GTGCCTTTGA AAAAACGGAT GTCAGTTCAT CATTATTTTT CGGTGCGCTG
AATGGCTTTG CTGTAACGAT TATCCTGAGC CTAGTGCAGA AAATCGAGCT TGGCATGATA
GCAAAAGGTT TGACACTAGG TGCCCGCTCC ATGTTGCCGG CCATTTATAT TCTATTATTT
GCCTGGACTA TCGCAGGTAT CATTGGCGAG TTAGAAACCG GTAAGTATAT GGCAAGCTTA
GCCACTAGTG GCAATATTCC TTTCGCGCTG TTACCTTCAG TATTATTTAT TTTGGCAGGC
ATTACCGCAT TTTCAACGGG AACCAGTTGG GGCACGTTTG GGATCATGCT GCCCATTGCC
GCAGACATGG CCATGGGAAG CGATAGCACC ATGATGCTAC CTATGTTGTC TGCGGTATTG
GCAGGCGCTG TATTTGGCGA TCATTGTTCA CCGATTTCAG ACACCACCAT TTTGTCTTCA
ACTGGGGCGA GTTGTCATCA TATCGACCAT GTGGTAACCC AATTACCTTA TGCGCTTATC
GCAGCAATGA TAAGCCTTGT GGGGTATTTA GTTTTAGGTT TTAGTCAGTC TTTACTCTAT
AGCCTTGCAG CAGCAAGTGG ACTATTCGTT ATTAGTGTTT TTATTCTCAA AGTGAAAGCT
AACCGTTATT TCTAA
 
Protein sequence
MTMNLITYSD SMLSLLPPLV AIILAIFTRH VLLSLGFGII IGALLLNDFS VMASGEFVAK 
SVSGLVWTDG GLNSWNLYII GFLMVLGMIT ALITVSGSAR AFAEWARLRI RSKRDAKLLT
IFLGCVVFID DYFNSLVVGA ISRPITDRYH VSRAKLAYVL DSTAAPVCVL SPISSWGAYI
IALIGGILTA HGFADSGHLS LFVQMIPMNF YAIFALLLLL CVAMFGLDVG PMRKHEMNAK
KGELFDESKG IPAGAIAELP EADTGSVLGL FLPILMLVLG TCYFMVSSGA NALQDANIEF
SLLGAFEKTD VSSSLFFGAL NGFAVTIILS LVQKIELGMI AKGLTLGARS MLPAIYILLF
AWTIAGIIGE LETGKYMASL ATSGNIPFAL LPSVLFILAG ITAFSTGTSW GTFGIMLPIA
ADMAMGSDST MMLPMLSAVL AGAVFGDHCS PISDTTILSS TGASCHHIDH VVTQLPYALI
AAMISLVGYL VLGFSQSLLY SLAAASGLFV ISVFILKVKA NRYF