Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2537 |
Symbol | |
ID | 4019054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3034481 |
End bp | 3036055 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956581 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_563539 |
Protein GI | 91793888 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0181032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATGA ACCTAATAAC TTATTCTGAT TCCATGCTTT CCTTACTCCC TCCTTTAGTT GCCATCATTC TGGCTATTTT CACCCGCCAT GTACTCTTGT CTCTTGGCTT TGGGATCATC ATTGGTGCCT TATTGCTTAA TGACTTTTCT GTGATGGCCA GCGGTGAATT TGTCGCTAAA AGCGTCAGTG GCCTAGTGTG GACGGATGGC GGACTTAACA GCTGGAATCT GTACATCATA GGCTTCCTGA TGGTGCTTGG GATGATCACG GCCTTGATAA CTGTCAGCGG CTCAGCTCGG GCATTCGCAG AATGGGCAAG GCTGCGCATT AGAAGCAAGC GGGATGCTAA ATTACTGACT ATCTTCCTAG GTTGTGTGGT GTTTATTGAT GATTATTTTA ACAGCTTAGT CGTAGGTGCA ATCTCTCGCC CCATTACCGA CCGATATCAT GTGTCTCGAG CTAAACTTGC CTATGTACTG GACTCGACAG CGGCGCCTGT GTGTGTCTTG TCGCCAATAT CCAGTTGGGG GGCATACATT ATTGCACTTA TTGGCGGTAT TTTAACGGCT CATGGTTTTG CCGATTCAGG CCATTTAAGC CTGTTTGTGC AGATGATCCC GATGAACTTC TATGCCATTT TCGCTTTGCT ACTGCTGTTG TGTGTTGCCA TGTTCGGTCT TGATGTCGGC CCAATGCGCA AACATGAAAT GAATGCCAAG AAAGGCGAGT TATTTGATGA ATCGAAAGGC ATTCCCGCTG GCGCCATAGC TGAACTGCCT GAAGCCGATA CCGGCAGTGT ATTAGGCTTG TTTTTGCCTA TTTTGATGTT GGTGTTGGGG ACTTGCTACT TTATGGTTTC AAGTGGTGCA AACGCGCTCC AGGATGCCAA TATTGAATTT AGTTTACTGG GTGCCTTTGA AAAAACGGAT GTCAGTTCAT CATTATTTTT CGGTGCGCTG AATGGCTTTG CTGTAACGAT TATCCTGAGC CTAGTGCAGA AAATCGAGCT TGGCATGATA GCAAAAGGTT TGACACTAGG TGCCCGCTCC ATGTTGCCGG CCATTTATAT TCTATTATTT GCCTGGACTA TCGCAGGTAT CATTGGCGAG TTAGAAACCG GTAAGTATAT GGCAAGCTTA GCCACTAGTG GCAATATTCC TTTCGCGCTG TTACCTTCAG TATTATTTAT TTTGGCAGGC ATTACCGCAT TTTCAACGGG AACCAGTTGG GGCACGTTTG GGATCATGCT GCCCATTGCC GCAGACATGG CCATGGGAAG CGATAGCACC ATGATGCTAC CTATGTTGTC TGCGGTATTG GCAGGCGCTG TATTTGGCGA TCATTGTTCA CCGATTTCAG ACACCACCAT TTTGTCTTCA ACTGGGGCGA GTTGTCATCA TATCGACCAT GTGGTAACCC AATTACCTTA TGCGCTTATC GCAGCAATGA TAAGCCTTGT GGGGTATTTA GTTTTAGGTT TTAGTCAGTC TTTACTCTAT AGCCTTGCAG CAGCAAGTGG ACTATTCGTT ATTAGTGTTT TTATTCTCAA AGTGAAAGCT AACCGTTATT TCTAA
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Protein sequence | MTMNLITYSD SMLSLLPPLV AIILAIFTRH VLLSLGFGII IGALLLNDFS VMASGEFVAK SVSGLVWTDG GLNSWNLYII GFLMVLGMIT ALITVSGSAR AFAEWARLRI RSKRDAKLLT IFLGCVVFID DYFNSLVVGA ISRPITDRYH VSRAKLAYVL DSTAAPVCVL SPISSWGAYI IALIGGILTA HGFADSGHLS LFVQMIPMNF YAIFALLLLL CVAMFGLDVG PMRKHEMNAK KGELFDESKG IPAGAIAELP EADTGSVLGL FLPILMLVLG TCYFMVSSGA NALQDANIEF SLLGAFEKTD VSSSLFFGAL NGFAVTIILS LVQKIELGMI AKGLTLGARS MLPAIYILLF AWTIAGIIGE LETGKYMASL ATSGNIPFAL LPSVLFILAG ITAFSTGTSW GTFGIMLPIA ADMAMGSDST MMLPMLSAVL AGAVFGDHCS PISDTTILSS TGASCHHIDH VVTQLPYALI AAMISLVGYL VLGFSQSLLY SLAAASGLFV ISVFILKVKA NRYF
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