Gene Sden_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2536 
Symbol 
ID4019053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp3033785 
End bp3034363 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID637956580 
Productthymidine kinase 
Protein accessionYP_563538 
Protein GI91793887 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0993549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCACAAC TTTATTTCTA TTATTCGGCG ATGAACGCGG GTAAGTCGAC TTCGTTATTA 
CAATCTTCCT ATAACTATCG TGAGCGCGGT ATGAATACCT TGGTGATGAC TGCATCCATT 
GATAATCGTT ATGGCATAGG TAAAGTGGCG TCTAGAATAG GTTTGCAAAC CGAAGCACAA 
GTGTTTGGTG AAGGTGATAA CTTAATTGAA TTGGTTGAAG CGACTCATCA GCAGACTAAA 
TTACATTGCG TATTAGTCGA TGAAAGCCAA TTTTTGAGTA AAGAGCAAGT GAGGCAATTA 
ACCCATGTGG TGGATAATTT AGATATTCCC GTGTTGTGTT ACGGTCTTCG CAGTGACTTT 
CAAGGTGAAC TATTTACCGG TAGTCAGTAT TTGCTGGCTT GGGCTGATAA GTTGGTGGAG 
CTTAAGACCA TTTGCCATTG CGGCCGCAAG GCGAATATGG TGGTCCGTCT TGATGGTGAA 
GGTAAGCCTA TGCGAGAAGG TGAGCAAGTT GCCATAGGCG GTAACGAGAG CTATGAATCT 
GTGTGCCGTA AGCATTTTCG TGAGTTTTTG TGGGATTAA
 
Protein sequence
MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVMTASI DNRYGIGKVA SRIGLQTEAQ 
VFGEGDNLIE LVEATHQQTK LHCVLVDESQ FLSKEQVRQL THVVDNLDIP VLCYGLRSDF 
QGELFTGSQY LLAWADKLVE LKTICHCGRK ANMVVRLDGE GKPMREGEQV AIGGNESYES 
VCRKHFREFL WD