| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2532 |
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| Symbol | |
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| ID | 4019035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3023968 |
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| End bp | 3025797 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956563 |
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| Product | ABC transporter related |
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| Protein accession | YP_563535 |
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| Protein GI | 91793884 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00690658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT TTTTTGAATC ATTAACCCAA CCCTTGCCCC CAGAAGAACC AACGCAGCCC
CCTTCTGGCG TGTATGCGTT CTGTCGCCAT TACACTCAAG GTTTTGGCGC CTTGCTGATC
ACCATGTCGG TATTAACCGC TATTTTAGCC ATGCTCGAAG TGTCTTTATT CGGCTTTATG
GGTCAGCTGG TGGATTGGCT TGTCACTAAA GACCCGCAAA CCTTGTGGCA AGATGAGAAA
ACTACCTTGG TCGCCATGTC TGTCATCGTC TTACTGGTGA TCCCACTGCT GGTGTGGCTA
CACGCATCGA TTGCCTACCA ATCTTTGCTG GGCAATTATC CCATGGCCAT TCGCTGGCAG
ACTCACAGGT ATCTGCTTAA ACAGAGCATT TCGTTTTATC AAGATGATTT TGCCGGCCGT
ATCGCCACGA AAGTGATGCA AACCTCACTT GCGGTGCGTG AAACCGTAAT GAAATTACTC
GATGTCCTGG TCTATGTGCT GGTGTATTTC ACCTCCATGT TAGTGATGAT AGCCAGCGCC
GATCTGCGCT TAATGCTACC TATGCTTGTC TGGCTCGCCG CTTATGTGGC AATTCAGTGG
AAATTAGTGC CTAAGTTAAA GGCTATTTCC ACTGAGCAAG CCGATGCACG CTCAACCATG
ACAGGACGCA TCGTCGACAG CTATACCAAT ATCTCGACAG TAAAACTCTT CTCCCATACT
AAGCAAGAAG CGGATTATGC CCGTGACAGC ATGATGATTT TCCTAAAAAC CGTTTATGGT
CAGATGCGCT TAGTGACTGT TATCAACGTA TCGGTGCAAA TCATCAACTA TGTGCTGGCC
TTTGTCATCG CTGCTGTGTC CATTTGGCTG TGGGCTGACA ATGCCATTAG TGTCGGCGCT
ATCGCCATTG CCGTGAGTTT AGCATTGCGC TTGAATGGCA TGTCCCAGTG GATCATGTGG
GAAATCAGTT CATTATTTGA AAATATTGGC ACTGTGACCG ACGGCATGAA TACCTTGTCT
AAGCCTATCG CTATCGAAGA TAAACCAGGC GCGAAAGACA TAGTTGTCAG CCAAGGAAAG
ATAGATTTCA ACCGAGTGAG CTTTCATTAC GGCGAGAAAA CCGGCGTTAT TGATGAATTA
AATCTTAATA TCAAGGCTGG CGAAAAAGTG GGGCTTGTTG GCCGCTCTGG CGCGGGTAAA
TCCACCCTAG TTAATCTGTT GATGCGTTTT CATGATGTTG AGCAAGGGCA AATATGCATA
GATGGACAAC CCATCACTGA CATTACCCAA GACTCGCTGC GGGCCAACAT AGGCATGGTG
ACTCAGGATA CCTCATTGCT GCACAGATCC ATTCGAGAGA ATGTGCTCTA TGGCGACCCC
AATGCCAGTG AAGCGCGCTT GATGGCCGCC ATCACTCAGG CTCAGGCGCA TGAGTTCATT
GAGCACTTAA CGGATCCCCA CGGCAATGTT GGCTTAGATG CACAAGTGGG TGAACGCGGG
GTTAAGCTTT CTGGTGGCCA AAGACAGCGT ATCGCCATCG CCCGTGTGTT ACTTAAAAAT
GCGCCGATTC TATTACTTGA TGAAGCCACC TCTGCGCTGG ACTCTGAAGT CGAAGCGGCA
ATCCAAGGCT CGTTGTACGA GTTAATGGAA GGCAAAACCG TTATTGCCAT CGCCCACAGA
TTATCCACCA TAGCGGCAAT GGACAGGCTC ATAGTGTTAG ATCAAGGTAA GATTGTTGAA
CAAGGCACAC ATCAAGAATT GATCGACGCT AAAGGCATAT ACGCGCAATT ATGGGCTCAT
CAAACCGGCG GTTTTATCGG TGTTGACTAG
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| Protein sequence | MFKFFESLTQ PLPPEEPTQP PSGVYAFCRH YTQGFGALLI TMSVLTAILA MLEVSLFGFM
GQLVDWLVTK DPQTLWQDEK TTLVAMSVIV LLVIPLLVWL HASIAYQSLL GNYPMAIRWQ
THRYLLKQSI SFYQDDFAGR IATKVMQTSL AVRETVMKLL DVLVYVLVYF TSMLVMIASA
DLRLMLPMLV WLAAYVAIQW KLVPKLKAIS TEQADARSTM TGRIVDSYTN ISTVKLFSHT
KQEADYARDS MMIFLKTVYG QMRLVTVINV SVQIINYVLA FVIAAVSIWL WADNAISVGA
IAIAVSLALR LNGMSQWIMW EISSLFENIG TVTDGMNTLS KPIAIEDKPG AKDIVVSQGK
IDFNRVSFHY GEKTGVIDEL NLNIKAGEKV GLVGRSGAGK STLVNLLMRF HDVEQGQICI
DGQPITDITQ DSLRANIGMV TQDTSLLHRS IRENVLYGDP NASEARLMAA ITQAQAHEFI
EHLTDPHGNV GLDAQVGERG VKLSGGQRQR IAIARVLLKN APILLLDEAT SALDSEVEAA
IQGSLYELME GKTVIAIAHR LSTIAAMDRL IVLDQGKIVE QGTHQELIDA KGIYAQLWAH
QTGGFIGVD
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