| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2529 |
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| Symbol | |
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| ID | 4019032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3020105 |
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| End bp | 3021385 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956560 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_563532 |
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| Protein GI | 91793881 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CTTTCGCCAC GACTTTTGCC GAATTTGGCT TACACAATGC CTTATTGTCA
CGACTTGTCG AATTAGACTA TCAAGTGCCA ACCCCTATTC AAGCCCAGAC CATAGGTAGC
ATTTTAGCGG GTAAAGACTT GTTAGCTGGG GCGAATACTG GCTCAGGAAA AACGGCGGCG
TTTGCTCTGC CCCTATTGCA TGCTTTGCTT TCAAAACCGC TAAAACCTCT TAAAGGTAAC
GGCGTTCGTG CGTTGGTGTT AGTGCCAACA AGAGAGCTTG CCAAACAAGT CGCCGACAGC
TTTAAGTCTT ATGCGGTTCA CAGTAATGGC GCCATTAAAG TTGTGGCAGC GTTTGGCGGA
GTCTCTGTGA ATACTCAGAT GCTGGCCTTA CGTGGCGGCG CTGATATTGT GGTGGCAACG
CCAGGTCGTT TGCTCGATTT ACTCTCTTCT AATGCACTCA AACTTGCCGA TGTCAGTACC
TTAGTGCTCG ATGAAGCCGA CAGAATGCTA AGCCTTGGGT TTACCGATGA AATCGGTCAA
ATCTTGGGGT TATTGCCCAA AAAGAAACAA ACCTTGTTAT TCTCGGCCAC CTTCCCTGAA
GAGGTGCGTC AATTAACCGA TGCCTTGCTG AATAGCCCCC TTGAAATCCA ATTGCAAAAT
CCTGAATCAA GCACTTTAGT GCAGCGAGTG ATGACGGTAA ACCGCGAGAA GAAAACCGCC
TTGTTAGCCC ATTTGCTCAA TGAGCATCAG TGGCGACAGG TGCTGATTTT CGTTGGCGCT
AAAAATAGCT GTAATCATCT GGCGCAAAAA TTGGCTAAGC GCGGCATTAC TGCCGAAGTG
TTCCACGGCG ATAAGGCCCA AGGCGCTCGA AGTCGTGTGC TTGAAGGGTT TAAAGCCGGC
GACATTCAAG TGTTGATCGC AACCGATATC GCAGCTCGTG GGCTAGACAT TGAAAAACTG
CCGGTGGTAA TCAACTTTGA TTTACCCAGA AGTCCCGCGG ACTACATGCA CAGAATTGGC
CGCAGCGGCC GTGCCGGTGA AGTGGGCTTA GCGTTAAGTT TATTGTCACA TGATGAATAC
CATCATTTCA CCGTGATAGA AAAAAAGAAC AAAATCAGGT TGGAGCGCGA GCAAGTGGCG
GGATTTGAAG CCGATGAGCA AATGCCTGAA GCCCTATTGG AGCAGGAAAA ACCCATGGCA
AAGCCCGAAG GCACAGGTAA GAAAAAACGC AAGGTCTTGC CGCAAGCCAA TGTGGATATT
TGGGGCAATA AAGCTGACTA G
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| Protein sequence | MTQAFATTFA EFGLHNALLS RLVELDYQVP TPIQAQTIGS ILAGKDLLAG ANTGSGKTAA
FALPLLHALL SKPLKPLKGN GVRALVLVPT RELAKQVADS FKSYAVHSNG AIKVVAAFGG
VSVNTQMLAL RGGADIVVAT PGRLLDLLSS NALKLADVST LVLDEADRML SLGFTDEIGQ
ILGLLPKKKQ TLLFSATFPE EVRQLTDALL NSPLEIQLQN PESSTLVQRV MTVNREKKTA
LLAHLLNEHQ WRQVLIFVGA KNSCNHLAQK LAKRGITAEV FHGDKAQGAR SRVLEGFKAG
DIQVLIATDI AARGLDIEKL PVVINFDLPR SPADYMHRIG RSGRAGEVGL ALSLLSHDEY
HHFTVIEKKN KIRLEREQVA GFEADEQMPE ALLEQEKPMA KPEGTGKKKR KVLPQANVDI
WGNKAD
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