| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2525 |
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| Symbol | |
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| ID | 4019028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3016034 |
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| End bp | 3017257 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956556 |
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| Product | serine/threonine transporter SstT |
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| Protein accession | YP_563528 |
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| Protein GI | 91793877 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.114081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTA ATCCATCACT TTTTAGCCGT ATTATTCATG GCAGCTTAGT ATTACAAATC
ATTGTTGGTA TAGCGTTAGC GGTTATTTTA GCCAGTGTGT CAGCGTCTGC GGCTAGTCAA
GTCGCTTTTC TTGGGGATTT CTTTGTTGGC GCCCTTAAGG CGATAGCACC CATTTTAGTG
TTTGTCTTGG TGGCATCCTC CATAGCCAAT CAAAAAAAGA ACAGTCACAC CAATATGCGG
CCGATTATTA GCCTTTATTT GATTGGTACC TTTGCCGCCG CATTAACGGC AGTGCTTTTG
AGTTTTTCCT TCCCCACCAC CTTAGTGTTG GTGACAGGAA TTGAAGGTTC GAACCCACCT
CAAGGTATTG CTGAAGTCTT AAATACCTTG TTATTTAAGT TGGTGGATAA TCCCGTTAAT
GCGTTAATGA CTGGTAATTA CATTGGCATT TTAGCCTGGG GTATTGGTTT AGGTATCGCG
CTGCACCACG GCACTGATGC AACCAAAGCC GTGCTTAATG ACATTAGTCA TGGGGTGTCG
CAAATGGTGC GCTTTGTTAT TCGATTAGCA CCTCTTGGTA TTTTTGGTTT AGTGGCAGGC
ACTGTAGCAG CGACAGGTTT TGATGCCTTA GCAGGTTACG CTCAGCTACT GATGGTGTTA
GTGGGGGCCA TGTTAATTAT GGCCTTGGTG GTGAATCCGT TAATTGTTTA CTTAAAAATT
AAACGTAACC CCTATCCTTT GGTGCTTAAA TGCCTAAGAG GTAGCGGGGT AACCGCATTC
TTTACCCGTT CCAGTGCGGC GAATATTCCG GTGAATATGG CTTTGTGTGA AGAGCTTAAA
CTTCACGAAG ATACGTATTC TGTTTCTATC CCCTTAGGGG CCACCGTTAA CATGGGTGGC
GCTGCGATTA CCATCACAGT GCTAACGTTA GCGGCGGCGC ATACCTTGGG CGTGCAAGTG
GACTTTGTCA CAGCATTATT ACTGAGCGTG ATGGCGTCCG TTGCAGCCTG CGGCGCCTCG
GGTGTTGCGG GTGGCTCGTT ATTGCTTATT CCACTTGCTT GTAGTCTATT TGGTATTTCT
AATGATATCG CCATGCAGGT TGTGGCAGTG GGCTTTATTA TTGGCGTAGT GCAGGACTCA
GCTGAAACCG CCCTTAATAG CTCCACCGAT GTGCTCTTTA CTGCAGCAGC CTGTGAAGCC
GCAGAAGCTA AAGCAAATAG TTAG
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| Protein sequence | MSSNPSLFSR IIHGSLVLQI IVGIALAVIL ASVSASAASQ VAFLGDFFVG ALKAIAPILV
FVLVASSIAN QKKNSHTNMR PIISLYLIGT FAAALTAVLL SFSFPTTLVL VTGIEGSNPP
QGIAEVLNTL LFKLVDNPVN ALMTGNYIGI LAWGIGLGIA LHHGTDATKA VLNDISHGVS
QMVRFVIRLA PLGIFGLVAG TVAATGFDAL AGYAQLLMVL VGAMLIMALV VNPLIVYLKI
KRNPYPLVLK CLRGSGVTAF FTRSSAANIP VNMALCEELK LHEDTYSVSI PLGATVNMGG
AAITITVLTL AAAHTLGVQV DFVTALLLSV MASVAACGAS GVAGGSLLLI PLACSLFGIS
NDIAMQVVAV GFIIGVVQDS AETALNSSTD VLFTAAACEA AEAKANS
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