| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2506 |
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| Symbol | |
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| ID | 4019009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2993085 |
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| End bp | 2994356 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956537 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_563509 |
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| Protein GI | 91793858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.947885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA TCCATACATC TGACTGGCAC CTTGGGCAAA ACTTTTATGG CAAGAGCCGG
GCAAGGGAAC ACAGGGCCTT TATGGACTGG CTGCTGGAGC AAATTGCACT GCACCAAGTA
GATGCGCTTA TTATTGCCGG TGATGTGTTC GATACCGGTA CGCCGCCAAG TTATGCTCGC
GCCCTTTATA ATCAATTCAT AGTGCAGATG CAGCAAAGTG AGTGTCAGCT GATTATTTTG
GGTGGCAATC ACGACTCTGT CTCCACTTTA AGTGAATCTA AAGAGTTATT AGCTTGCCTC
AATGCTCGGG TAATACCAGG GGCTTTTGAT AACATCAGCG AGCATGTGTT TGAACTTAAC
AATCGCAAAG GGGAGGTGGG CGCTATCATT TGTGCGCTGC CTTATTTGCG TCCAAGGGAC
ATGATGCTCA GCCAGGCAGG CCAATCAGCA ACGGACAAAC AGCAACAGTT AGCTAATGCC
ATTGCCGCGC TTTATCAAGA TAGTTTTGCC ATTGCCCAAA GCATTCAGGC AAAGCAACAA
GCGCCAGTGC CTATCATTGC CACAGGTCAT TTAACCACGG TCGGGGCATC AACTTCAGAG
TCGGTACGAG AAATCTATAT CGGCAGTCTC GATGCCTTCA ATGCCAACCT TTTTCCTGCT
GCGGATTATA TTGCCCTTGG GCATATTCAC AGGCCACAGA AAATCGCTAA AACAGAGCAT
ATACGCTACA GCGGCTCGCC GATCCCGTTG AGTTTTGATG AACTCAATGG TGACAAAAGC
GTATTTTTAG TTGAGTTTGA TGGCATATCC CCAACCGTCA CTGGACTCGT CGTGCCAAAG
TTTCAGCCCC TTGCCGTAAT AAAGGGCGAT TTAGCGCATA TAGAGACGCA AATTAATCGA
CTCGCAGCAG ATGAAGCCAT TGAAGAGAGT GGCAATCAGT TAAACCACAA CACTTGGTTA
AGTGTGGAGG TGAGTGAGCA AGATTATTTG TCTGACTTAC AGACTCGTAT AGGCGAGCTT
ATTGACGGCA AACCATTGGA AGTGTTGCAG TTAAAAAGGG CTCGAACGGC AAGGAGCGCG
CAGATTGAGC GAGTTGATAA CGAAATTCTC GCCGAATTAT CTGTGACTGA AGTCTTTGAG
CGGCGTCTCG CACAAGAGGA GTGGTCAAGC GATGACCAGC TGAAAAAGCG TGGCCGAATT
CAAGCTCAGT TTCAGCAAGT ATTAGCCAGC GTCGAAGAGT CGCTAATTCA AGGCGTGGAG
GACAAAGAAT GA
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| Protein sequence | MRIIHTSDWH LGQNFYGKSR AREHRAFMDW LLEQIALHQV DALIIAGDVF DTGTPPSYAR
ALYNQFIVQM QQSECQLIIL GGNHDSVSTL SESKELLACL NARVIPGAFD NISEHVFELN
NRKGEVGAII CALPYLRPRD MMLSQAGQSA TDKQQQLANA IAALYQDSFA IAQSIQAKQQ
APVPIIATGH LTTVGASTSE SVREIYIGSL DAFNANLFPA ADYIALGHIH RPQKIAKTEH
IRYSGSPIPL SFDELNGDKS VFLVEFDGIS PTVTGLVVPK FQPLAVIKGD LAHIETQINR
LAADEAIEES GNQLNHNTWL SVEVSEQDYL SDLQTRIGEL IDGKPLEVLQ LKRARTARSA
QIERVDNEIL AELSVTEVFE RRLAQEEWSS DDQLKKRGRI QAQFQQVLAS VEESLIQGVE
DKE
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