Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2502 |
Symbol | |
ID | 4019005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2983139 |
End bp | 2985007 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637956533 |
Product | hypothetical protein |
Protein accession | YP_563505 |
Protein GI | 91793854 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.547349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAGA AAACACTCAA ATGGATTGGT GCAGGCACGT TGGGGCTAGC GACTGTTACC GCGGGATTTG CCGCTCATGA ATGGTATGCG GATAAACCGT TTATGTTTAG GGCCTTTTTA GACAGAGAAA TGGTTAAAGT CGCTTTTAGC GATCCTGAAA CCCTCACTTC ACTGGGTTTT TTAGAGTCGG TAGGCATAAC GGGCCATAAT GCCCATCTTG ATGATGAAGC GCCTGAGCGA ACCGAAGAGA TGTTTGCTCA TTTAAAGCAG ATCCGTGAAG GCCTTGAACA GTACAGTGAT GCAAGCCTAT CCCAAGAGCA ATTGATGACT AAAAATGTCG CCATGTATCT GCTGAATATG GCTGAGAAGG CCGAGGTGTT CCAATATCAT ACGTATCCTG CCAATCAGCT TTTTGGTATT CAAAATCAAT TCCCAAGTTT CATGGAATCA TCCCACCAGG TACACAGCGT CGAGGATGCA CAGAATTATC TTTCACGTTT AGGGGAGCTT GAGCGTAAAT TTAGCCAGCA ATTAATTGGC CTTAAACTGC GGGAAGAGAA AGGCATTATT CCGCCGTTAT TTGTAATTGA ACGTGTGCTC GATGAGATGC GCGCCTTTGT GGCCACCCCG CCACTTGAAA ATATTCTCTA TGCTTCATTG GATAAAAAAC TCAATGAGTC AGAAGATATA ACCCAAGAAC AGCGCCAAAG CTTATTGTCC CAAACTGAAA TTGCTATCAA TGAGCAAATA TACCCAGCCT ATGGCCTGTT GATTGATTAT TTTGATGGCC TTAAAACTAA GGCGGGAAAT GATGATGGTT ACTGGCGCCT ACCTCAAGGC GCAGAGGCTT ATAAGTTTGC TTTAAAATTC TTTACCACCA CAGATTACAG CCCAGAATAC ATACATAATT TAGGTTTACA GGAGGTGGAG AGAATTCAAG CTGAAATGCT AACTATTTTT AAACAGCAGG GAGTTAACAT TGACTCTGGC TACTTGGCTG CTATGGACGC TTTCTCGGCA AAGCCTGAAT ATTATTATGA GGATTCAGAT GCAGGGCGCG CGCAAATTCT TATTGATTAT CAAACTATTT TAGATGAAAT CGATAAAGGT CTAACAAGTG CTTTCAATAT ACGTCCAGAA GCGGGCATGG AAGTGGTGCG TATTCCTGAG TTTAAAGAAA AAACCTCACC GGGTGCTTAT TATCAGCCAC CAGCCCTTGA TGGCAGTCGT CCAGGGCGTT TTTTTGCCAA TCTTTACGAT GTGAAAACTA CACCAAAATT TGGCATGCGC ACCTTGGCTT ATCATGAAGG GATCCCAGGG CACCACTTTC AAGTGACCAT CGCCATGGAG CTTGAGGGCA TGCCACTCAT TCGCCGCTTC GCGCCATTTA CTGCGTACAG TGAAGGTTGG GCACTCTATG CCGAACGGGT AGCGTTTGAG CAAGGTTTTC AGTCAAAACC TGAAGATAAT ATTGGCAGGC TTAGCGCAGA ACTCTTTCGT GCGGTGCGGT TAGTGGTTGA TACAGGTATA CATCACAAAC GCTGGACTCG AGCCGAAGCT ATAGACTATA TGGCGAGCCA CACAGGTATG GCAGAGCGGG ATGTGGTGGC AGAAATTGAG CGTTATATTG TTATGCCTGG TCAAGCCACG GCTTATAAAG TGGGCATGAT AAAAATTCTT GAGCTACGTC AAAAAGCCAT GGATAAACTG GGGGATAAGT TTGATATTCG TGAGTTTCAT GATGCTGTGC TTAAAAATGG TGCCATGCCG CTAGATTTGC TCGAACAAGT CATCGACAGC TACATTGCCA ATACAAGCAC TGAAGCTGCA GGTTCAGCTG TGGCCTTAAA AGAGACCAGC AATCTGTAA
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Protein sequence | MLKKTLKWIG AGTLGLATVT AGFAAHEWYA DKPFMFRAFL DREMVKVAFS DPETLTSLGF LESVGITGHN AHLDDEAPER TEEMFAHLKQ IREGLEQYSD ASLSQEQLMT KNVAMYLLNM AEKAEVFQYH TYPANQLFGI QNQFPSFMES SHQVHSVEDA QNYLSRLGEL ERKFSQQLIG LKLREEKGII PPLFVIERVL DEMRAFVATP PLENILYASL DKKLNESEDI TQEQRQSLLS QTEIAINEQI YPAYGLLIDY FDGLKTKAGN DDGYWRLPQG AEAYKFALKF FTTTDYSPEY IHNLGLQEVE RIQAEMLTIF KQQGVNIDSG YLAAMDAFSA KPEYYYEDSD AGRAQILIDY QTILDEIDKG LTSAFNIRPE AGMEVVRIPE FKEKTSPGAY YQPPALDGSR PGRFFANLYD VKTTPKFGMR TLAYHEGIPG HHFQVTIAME LEGMPLIRRF APFTAYSEGW ALYAERVAFE QGFQSKPEDN IGRLSAELFR AVRLVVDTGI HHKRWTRAEA IDYMASHTGM AERDVVAEIE RYIVMPGQAT AYKVGMIKIL ELRQKAMDKL GDKFDIREFH DAVLKNGAMP LDLLEQVIDS YIANTSTEAA GSAVALKETS NL
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