Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2500 |
Symbol | |
ID | 4019003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2981409 |
End bp | 2982149 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956531 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_563503 |
Protein GI | 91793852 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00783513 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGG CTATTGCAAC CAGGATAGAA CAGCACACTG TCTTTGTGGG CGATCTGCAT TTAAGTGCCG ATCGCCCCGA TATCAGCCAA GCTTTTTTAG CTTTTCTCAG TCATGGCTTA GATAATGTCG AGGCGCTGTA CGTCCTTGGT GATTTATTTG AAGTCTGGAT GGGCGATGAT ATTGCAGAGC CTTTCAGTTT AGAGATAGCG CGCGCACTGC AGCAAGTATC CCAGCGCATG CCAGTGTATT TCACCCAAGG TAACCGTGAC TTTCTGGTGG GCAAGGACTT TTGCCAACGG GCAGGCATGA CGCCCTTAGC GGATGTTCAT TGCACAACAC TTTATGGCAT TCAAACTGTG ATTTTACACG GTGATAGTCT GTGCACCTTA GATGAAGCCT ACCAAAAGTT TCGCCGTTTT CGCTCCATCA AGCTGGTTCG CTGGTTATAC ACTCAACTGC CTCAATCCCA ACGCTTAAAG ATTGCGCAAA ACATTCGCAA CAAGAGCAAA AAAGATAATC AGTATAAGAG CACTGAAATC ATGGACGTTG AGCCACAAGC CGTCGATGCA CTGCTTGAGC AAACTCACTC AACCCGAATG ATCCACGGCC ACACCCATAG ACCTGCGATT CATCAGCTTG CCAATAACAG GCAACGTCTG GTAGTCGGTG ATTGGTATGA TCAAGGCAGC ATATTACGCA TCGGACCATC CTTGTGCGAA CTGAACTCAC TGCCACTTTA A
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Protein sequence | MTQAIATRIE QHTVFVGDLH LSADRPDISQ AFLAFLSHGL DNVEALYVLG DLFEVWMGDD IAEPFSLEIA RALQQVSQRM PVYFTQGNRD FLVGKDFCQR AGMTPLADVH CTTLYGIQTV ILHGDSLCTL DEAYQKFRRF RSIKLVRWLY TQLPQSQRLK IAQNIRNKSK KDNQYKSTEI MDVEPQAVDA LLEQTHSTRM IHGHTHRPAI HQLANNRQRL VVGDWYDQGS ILRIGPSLCE LNSLPL
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