| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2489 |
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| Symbol | |
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| ID | 4018989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2967046 |
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| End bp | 2967939 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956517 |
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| Product | transcription activator, effector binding |
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| Protein accession | YP_563492 |
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| Protein GI | 91793841 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA TGGAAGATTA TCAACAAAAG TTTGAGCGGG TGCTAAGCCA TATTGATGAG
CATTTGTCCA AGCCCTTGGC CGTTGATACT TTGATTGCAA TCGCAGGCTT ACCTCAAACT
CAGGGTCAAG GGCATTTCCT GCGCTTGTTT AGCGCCATGT ATGGTATTGA ACTTATCGAT
TACATCAACC TACTTAGAGA CTTACAATCT GTGTTTGAGT TGGCTTACCG GCCAAATATA
TCCATGGCTG ATATAGCATC AAATGCCAGC TTTCAATGCC CTAAGGCCTT CTCTGAGGAC
TTTAACGCAA GAAACGGCAT GACACCTGAA GCCTTCAGGT TGAAACCCGA GTGGAACGCA
TGGTTTGAAA AGCAAGCGGC ATTAGACACT ATGCGTACGC CGAACTTAGC CTCTAACGAT
ATTCACCACA AAGTGACTTT AGTGGACTTA GCTAGCATCG AACTTGCTGT GGTTGAACAT
AGTGGGCCGG TATCAAATTT ACACGGCAGT TTGCAGGCTT TTATCGGTTG GCGACGAGCA
ATGCATACGC CGCCCCTTGT CAGTCGCAGC TTTAATCTTG TTTATCATGA CGTTAAACAT
GTGCCAGCTT CTGAGTATCG ATTGGATATT GGCGCCGAAA TCGGCCGGCC ATTAACGGCG
CAGGATGTGG GTATGGTAAG TAAACAGTTG CCCAAAGGGC GCTACGCATT ACTTGCTCAC
ACAGGCAATG AGGCAAGCCT AGGGGAGGCG ATAAACGACT TATACGGGCA ATGGCTGGTG
AACAGCGGCG AGCCGTTAGC CGACTTCCCC TTAGTGCTTG AACGAGTCAC GCAGTTCCCC
GATGTGGCCC AACATAAAGC CGTCACCCAT ATTTATCTTG GGCTTAAAAC ATAA
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| Protein sequence | MNMMEDYQQK FERVLSHIDE HLSKPLAVDT LIAIAGLPQT QGQGHFLRLF SAMYGIELID
YINLLRDLQS VFELAYRPNI SMADIASNAS FQCPKAFSED FNARNGMTPE AFRLKPEWNA
WFEKQAALDT MRTPNLASND IHHKVTLVDL ASIELAVVEH SGPVSNLHGS LQAFIGWRRA
MHTPPLVSRS FNLVYHDVKH VPASEYRLDI GAEIGRPLTA QDVGMVSKQL PKGRYALLAH
TGNEASLGEA INDLYGQWLV NSGEPLADFP LVLERVTQFP DVAQHKAVTH IYLGLKT
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