| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2484 |
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| Symbol | |
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| ID | 4018984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2961690 |
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| End bp | 2962580 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956512 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_563487 |
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| Protein GI | 91793836 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.016758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCA TTAAAATTTA CCAAGAGGAT AATATTGCCT CGCCGTCATT GCGAGTCTGG
CAAGCGTTTT CCGCAAATCC TGCTTCCCTT ATTTCGCTGT GGGTAGTGTT ATTTCTGTTG
CTGCTCATTG GCTTTGGACC GTTTCTTGCG CCCTTCGCCC CTGAAGCCCA GCAGGCTCAT
ACGATATTAA TGCCACCCTC TTGGGATATA GACGGTCATG TAGAGCACTT TTTTGGCACA
GATGACTTGG GCAGAGATAT TTTTAGCCGC ATTCTGCACG GAGTGAGACT CACCTTTGGC
ATGTCGTTAC TTATCGTGAC TGCGGCCTTA GGGGCTGGAT TTCTGATCGG CGCCATCTCC
GGCATGATGA AAGGCATAAA ATCGAGTATT TTGGGGCATT TACTGGATGC CTTGATGTCA
ATTCCTTCCT TGCTAATGGC CATTTTGGTG GTGGCCATTA TCGGGCCTGG GCTATTTAAC
GTATTTTGGG CCGTCGGCAT TGCCATGACG CCGCAATTTA TTCGCGCCAT CCATCAAGCG
GTTCATGAAG AGCTGCAAAA AGAATATGTG ACTGCGGCCC GTCTCGATGG CGCCAACAAT
TGGCAAATCT TCTGGTTTGT TATCATGCCC AATGTGTGGG ATGTGGTCAT AGTGCAAACC
ACGCTGGCCA TTTCAGCGGC AATCCTTGAT ATCGCCGCAC TGGGCTTTTT AAATTTAGGC
GCGCAAGCAC CCAGCGCTGA GTGGGGTTCC ATGGTACTGC AAGCCTTAGA TAATTTGCTC
ATCGCCCCTT GGACTGTCAC CATCCCTGGC GCGGCGATTT TATTTAGCGT ACTGTCGATT
AATCTGGTGG GTGACGGTCT GCGCTCAGCC CTCGCTGCTA TAAGAAACTA A
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| Protein sequence | MPRIKIYQED NIASPSLRVW QAFSANPASL ISLWVVLFLL LLIGFGPFLA PFAPEAQQAH
TILMPPSWDI DGHVEHFFGT DDLGRDIFSR ILHGVRLTFG MSLLIVTAAL GAGFLIGAIS
GMMKGIKSSI LGHLLDALMS IPSLLMAILV VAIIGPGLFN VFWAVGIAMT PQFIRAIHQA
VHEELQKEYV TAARLDGANN WQIFWFVIMP NVWDVVIVQT TLAISAAILD IAALGFLNLG
AQAPSAEWGS MVLQALDNLL IAPWTVTIPG AAILFSVLSI NLVGDGLRSA LAAIRN
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