| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2473 |
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| Symbol | |
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| ID | 4018973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2951590 |
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| End bp | 2952327 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956501 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_563476 |
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| Protein GI | 91793825 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.733857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGGATT ATCGAGCTGG AAAAGATTTA CTCATTAACA AAACGATCTT AGTGACAGGT
GCTGGCGATG GCATAGGTAA AGCCGCTGCA ATAGAATTTG CAAAATTTGG CGCGACCGTC
ATTTTGCTCG GCAAGACAGT CAAAAAACTT GAAAATGTCT ACGACATTAT TGTCAATGCT
GGCTACCCTA CTCCAGCCAT AGTGCCACTG GATCTAAAAG GTGCCACTGA GCAACATTAC
AAAGACATGG CAGACACCAT AGCCGAGCAA TTTGGTCATT TAGATGGCTT ATTGCACAAT
GCCAGTCAGC TAGGGGCCTT AGGGCCTTTT GAACATATCG ATTTAACTTC ACTTGAAGAT
ATCATGAAGG TGAATGTTAC GGCTCAAGTG TTACTAACCA AAGCCTTGTT ACCTATCATG
CGTAAAGCCC CCAGTGGCTC TATCATCTTT ACCTCAAGCG GTGTTGGCCG CCAAGGAAAG
GCCTACTGGG GACCCTATGC GTTTTCTAAA TTTGCCACCG AAGGCATGAT GCAAGTGCTT
GCCCATGAGT GTGATGGCAC CAGCATCAGA GTGAACAGCA TAAATCCAGG TGCAACTCGC
ACCGAAATGC GTGCTAAAGC CTACCCAGGT GAAGATCCTA TGAGCCTTAA AGCGGCTGAA
GACATAATGC CAACTTACTT ATTCCTCATG GGTGAAGATT CAGTGAATAC CAATGGTGCT
CAGTTAAACG CCCAATAA
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| Protein sequence | MLDYRAGKDL LINKTILVTG AGDGIGKAAA IEFAKFGATV ILLGKTVKKL ENVYDIIVNA
GYPTPAIVPL DLKGATEQHY KDMADTIAEQ FGHLDGLLHN ASQLGALGPF EHIDLTSLED
IMKVNVTAQV LLTKALLPIM RKAPSGSIIF TSSGVGRQGK AYWGPYAFSK FATEGMMQVL
AHECDGTSIR VNSINPGATR TEMRAKAYPG EDPMSLKAAE DIMPTYLFLM GEDSVNTNGA
QLNAQ
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