| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2471 |
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| Symbol | |
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| ID | 4018971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2947684 |
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| End bp | 2948697 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956499 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_563474 |
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| Protein GI | 91793823 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000173214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTT TATACGAATA CGGTTTGTTT TTAGCTAAGG CTGTGACGAT TTTATTGTCT
GTACTGGCGG TAATTACCAT GGTGCTGATG AGCGCGATTA AGCAAAAATC AGATAAAGGC
GAGTTGAGCT TAACCCATGT TTCTGAAGAA CTGACGGCGC TTAAGCACGA TCTTAAGCAA
GAGTTGCTGA CTAAAAAGCA GTTTAAGGCC TACGAAAAGC AACTAAAAGC TGATGAAAAA
GCGAAAGAGA AGCAAGATGA AGTCAAACAA GCAACAGTGT TTGTTATTGA TTTTAAAGGC
AGTATCGATG CCAATGAAGT CAGCTCGCTT CGAGAAGAAA TTACCGCGAT TTTGACCATA
GCCGAAGCGG ATGATGAGGT TATCGTCAAT GTAGAAAGTG GTGGCGGCAT GGTGCACGGC
TATGGTTTAG CCGCCAGTCA GCTGGACCGT CTGCGTCAAG CCAATATCAA GTTTAGTGTG
TGTATCGATA AAGTCGCTGC CAGCGGCGGT TATATGATGG CCTGTGTTGC GAATAAAATT
TACGCCGCGC CCTTTGCTAT TGTGGGCTCC ATTGGCGTGG TCGCACAATT GCCCAATTTT
CACCGTTTGC TGCAAAAGCA TGATATCGAT TATGAGCAAC ATACCGCCGG TGACTTTAAG
CGTACTTTGA CCTTATTCGG TCAAAATACC CAAGAAGGTA GGGACAAGTT CCAGCAAGAG
CTTGAAGAAA CCCACGTGCT ATTCAAATCT TTTGTGGGTC AATATCGGCC CGAGATGGAT
ATCGCTAAAG TTGCCACGGG GGAGCATTGG TATGGCCAGC AAGCGATAGA ATTAGGTTTA
ATTGATGCTA TCAGCACCAG TGATGATGTG CTGCTGAATT TGGCAAAAGA GCACAGGGTG
ATTAAGGTTA AATACCAAAT CAAGAAAAAA CTCAGCGATA AACTCGCCCA TGGGGTGTCA
TTATCTGTCA GCTCAATCGT TAATCGCTTA ATGGAAATTA ATCGTCCGAG CTAA
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| Protein sequence | MEFLYEYGLF LAKAVTILLS VLAVITMVLM SAIKQKSDKG ELSLTHVSEE LTALKHDLKQ
ELLTKKQFKA YEKQLKADEK AKEKQDEVKQ ATVFVIDFKG SIDANEVSSL REEITAILTI
AEADDEVIVN VESGGGMVHG YGLAASQLDR LRQANIKFSV CIDKVAASGG YMMACVANKI
YAAPFAIVGS IGVVAQLPNF HRLLQKHDID YEQHTAGDFK RTLTLFGQNT QEGRDKFQQE
LEETHVLFKS FVGQYRPEMD IAKVATGEHW YGQQAIELGL IDAISTSDDV LLNLAKEHRV
IKVKYQIKKK LSDKLAHGVS LSVSSIVNRL MEINRPS
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