Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2471 |
Symbol | |
ID | 4018971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2947684 |
End bp | 2948697 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637956499 |
Product | putative periplasmic protease |
Protein accession | YP_563474 |
Protein GI | 91793823 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000173214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAATTTT TATACGAATA CGGTTTGTTT TTAGCTAAGG CTGTGACGAT TTTATTGTCT GTACTGGCGG TAATTACCAT GGTGCTGATG AGCGCGATTA AGCAAAAATC AGATAAAGGC GAGTTGAGCT TAACCCATGT TTCTGAAGAA CTGACGGCGC TTAAGCACGA TCTTAAGCAA GAGTTGCTGA CTAAAAAGCA GTTTAAGGCC TACGAAAAGC AACTAAAAGC TGATGAAAAA GCGAAAGAGA AGCAAGATGA AGTCAAACAA GCAACAGTGT TTGTTATTGA TTTTAAAGGC AGTATCGATG CCAATGAAGT CAGCTCGCTT CGAGAAGAAA TTACCGCGAT TTTGACCATA GCCGAAGCGG ATGATGAGGT TATCGTCAAT GTAGAAAGTG GTGGCGGCAT GGTGCACGGC TATGGTTTAG CCGCCAGTCA GCTGGACCGT CTGCGTCAAG CCAATATCAA GTTTAGTGTG TGTATCGATA AAGTCGCTGC CAGCGGCGGT TATATGATGG CCTGTGTTGC GAATAAAATT TACGCCGCGC CCTTTGCTAT TGTGGGCTCC ATTGGCGTGG TCGCACAATT GCCCAATTTT CACCGTTTGC TGCAAAAGCA TGATATCGAT TATGAGCAAC ATACCGCCGG TGACTTTAAG CGTACTTTGA CCTTATTCGG TCAAAATACC CAAGAAGGTA GGGACAAGTT CCAGCAAGAG CTTGAAGAAA CCCACGTGCT ATTCAAATCT TTTGTGGGTC AATATCGGCC CGAGATGGAT ATCGCTAAAG TTGCCACGGG GGAGCATTGG TATGGCCAGC AAGCGATAGA ATTAGGTTTA ATTGATGCTA TCAGCACCAG TGATGATGTG CTGCTGAATT TGGCAAAAGA GCACAGGGTG ATTAAGGTTA AATACCAAAT CAAGAAAAAA CTCAGCGATA AACTCGCCCA TGGGGTGTCA TTATCTGTCA GCTCAATCGT TAATCGCTTA ATGGAAATTA ATCGTCCGAG CTAA
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Protein sequence | MEFLYEYGLF LAKAVTILLS VLAVITMVLM SAIKQKSDKG ELSLTHVSEE LTALKHDLKQ ELLTKKQFKA YEKQLKADEK AKEKQDEVKQ ATVFVIDFKG SIDANEVSSL REEITAILTI AEADDEVIVN VESGGGMVHG YGLAASQLDR LRQANIKFSV CIDKVAASGG YMMACVANKI YAAPFAIVGS IGVVAQLPNF HRLLQKHDID YEQHTAGDFK RTLTLFGQNT QEGRDKFQQE LEETHVLFKS FVGQYRPEMD IAKVATGEHW YGQQAIELGL IDAISTSDDV LLNLAKEHRV IKVKYQIKKK LSDKLAHGVS LSVSSIVNRL MEINRPS
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