Gene Sden_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2465 
Symbol 
ID4018965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2940263 
End bp2940778 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID637956493 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_563468 
Protein GI91793817 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000037503 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CGAACAGTTT CACCAAAGAA CAACTTATTG CCTGCGGCCA AGGCGAGCTT 
TTAGGCGCTA ATTCACCTAA ATTACCTATC GATAACATGT TAATGGTCGA TCGCATTGTC
CGCATCAATG AAGACGGCGG GGCTTTTGGT AAGGGTGAAA TTATCGCTGA ACTCGATATT
AACCCTACGC TGTGGTTCTT CGATTGTCAC TTTAAAGGCG ATCCAGTAAT GCCTGGCTGC
TTAGGCTTAG ATGCCATGTG GCAACTTGTC GGTTTCTATC TTGGCTGGGA AGGCGCACAA
GGCAAAGGAC GTGCACTAGG TGTGGGTGAA GTTAAATTTA CTGGTCAAGT ATTGCCTGAT
GCTAAAAAAG TGACTTACAA GCTTAATATC AAACGCAAAA TTCACCGTAA GCTCGTCATG
GGCATTGCCG ATGCCACCAT GGAAGTCGAT GGCCGTGAAA TATACAGTGC AACGGATCTT
AAAGTCGGTA TTTTCAGTGA CACCTCTACG TTTTAA
 
Protein sequence
MEKANSFTKE QLIACGQGEL LGANSPKLPI DNMLMVDRIV RINEDGGAFG KGEIIAELDI 
NPTLWFFDCH FKGDPVMPGC LGLDAMWQLV GFYLGWEGAQ GKGRALGVGE VKFTGQVLPD
AKKVTYKLNI KRKIHRKLVM GIADATMEVD GREIYSATDL KVGIFSDTST F