Gene Sden_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2459 
Symbol 
ID4018958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2931040 
End bp2932491 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content43% 
IMG OID637956486 
Productanion transporter 
Protein accessionYP_563462 
Protein GI91793811 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA TTCAGGCAAA AACGACACCG ATCATAATGT TATTGATGGG GCCATTGTTA 
ATGGCGATCA CCTTAATTTT CCCTGTGCCA TTTGAAGGAA TGAATGAACT GGCGTGGTAC
ACCTTAGGTT TGACGTTATG GATGGCAACT TGGTGGGTGT CAGAGGCTGT ACCTGTTGAA
GTCACCGCCT TTTTGCCTTT AGTTGTAGTG CCTTTGGTTG GGATTGCTTC GATTGAGGCT
GTGACTGCAC CCTATGCTAA TCCATTAATT TTCCTATTTT TAGGTGGCTT CTTAATTTCC
ATCGCGATGG AGCGTTGGAA TTTACACAAG CGTATCGCAT TGACGGCAAT GACATTAGTG
AGTTCGAAAC AGAGTCATCA AATTGGCGGT ATGATGGCAG TGACTGCTTT TTTATCAATG
TGGATGTCCA ATACTGCCAC TACCGTGATG ATGTTACCCA TAGGGTTATC TGTGATTGAA
ATGGTCAAAA GCCATAGTGG GCAAGCAAAT CAAGCATTTT CTAAAGCCAT GTTATTGTCG
ATTGCTTTTT CTGCATCCAT TGGTGGCTTA GCGACATTAA TTGGAACGCC GCCAAACGCC
TTGATGGCAG CTTATTTATC TGAGACCTAT CAGATAAAAA TTGGTTTTGC GCAGTGGATG
ATAATCGGTG TGCCATTATC CCTGGTGATG CTGGTACTTT GTTGGTTGAT TTTGACTAAA
TTCTCTTTCA ATTTAACCAA TGACAGTGAA GTAGATACTC GCTCGATGTT TAAGCAAAAG
CTTACGGAAC TTGGGGGGAT GAGTAAAGGA GAAAAGTATG TGTTAGCCTG TTTCGCACTC
GCAGCAATGG GGTGGATATT TAGGCCCTTG ATAACCAAAG CGACAGGTTT AGCCATTAGT
GATACAGGTA TTGCCATGTT TGTGGGCTTA TTGCTGTTTA TTGTGCCCAT TGATCGTAAC
AGTGACACAC GTATTTTAGT GTGGAGTGAT ACTAAAAAAC TTCCTTGGGG CGTATTAATG
CTTTTCGGTG GTGGATTATC ACTAGCTGCC TTAATTAATC AATCAGGATT AGCGGCATAT
ATTGGTAATC TATTAGCAGG TGCGGATAAT TTCTCGATTT TAGTGGCTGT TTTATTGGTG
ACTATTACTA TCATTTTCTT AACCGAAGTT ACCAGCAATA CCGCTACAGC GGCGAGTTTC
TTACCATTAT TAGGCCCTAT CGCTGTAACG TTAACCGATG ATCCTTTGAC GTTAGTCATC
CCTGCGGCAT TAGCGGCAAG TTGCGCATTT ATGATGCCAG TGGCAACACC ACCGAATGCG
ATTATTTTTG GCTCCGGCCA GTTACGAATT GTTGATATGG CCAAAGCTGG TTTTTGGCTT
AACATTGCCG CGGTTGTGTT GATTGTAGCC ATGATGATGA CCTTCATCCC CAGTGTGTTA
GCAAGCGAGT AA
 
Protein sequence
MSNIQAKTTP IIMLLMGPLL MAITLIFPVP FEGMNELAWY TLGLTLWMAT WWVSEAVPVE 
VTAFLPLVVV PLVGIASIEA VTAPYANPLI FLFLGGFLIS IAMERWNLHK RIALTAMTLV
SSKQSHQIGG MMAVTAFLSM WMSNTATTVM MLPIGLSVIE MVKSHSGQAN QAFSKAMLLS
IAFSASIGGL ATLIGTPPNA LMAAYLSETY QIKIGFAQWM IIGVPLSLVM LVLCWLILTK
FSFNLTNDSE VDTRSMFKQK LTELGGMSKG EKYVLACFAL AAMGWIFRPL ITKATGLAIS
DTGIAMFVGL LLFIVPIDRN SDTRILVWSD TKKLPWGVLM LFGGGLSLAA LINQSGLAAY
IGNLLAGADN FSILVAVLLV TITIIFLTEV TSNTATAASF LPLLGPIAVT LTDDPLTLVI
PAALAASCAF MMPVATPPNA IIFGSGQLRI VDMAKAGFWL NIAAVVLIVA MMMTFIPSVL
ASE