| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2457 |
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| Symbol | |
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| ID | 4018956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2929251 |
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| End bp | 2930297 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637956484 |
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| Product | Sel1 |
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| Protein accession | YP_563460 |
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| Protein GI | 91793809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.392587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTATCTGTTT TATTTTGATG TGTATTGCAT CATTTAACTG TTATTCCAGT
GTTGAACATG CAGAGTTAGC AATGAATAAT GGTGATTATG TGACTGCATT TGAAATCATT
GAGTCTTTAG CTGGTGAAAA AAATCATGAA CCCATTAATT ATTTAGCTAA TTTCTATGAT
GAAGGTCTGG TTGTTGATAT GGACCAGCAA AAAGCCGTTA TGTTATATAA ACAGGCTGCA
GAGCTTGGCA ATATAAAGGC GCAGTTTAAC TTGGGACTTT CTTATTATGG AGGTCAAGGA
ATTGACATTA ATTATGAGTT AGCGTTCGAA TGGCTGCTTA AGACGGCAAA GCAAGGATTT
GAACCTGCTT ATGATGTTGT TGGGTCAATG TATTCAAAAG GACAGGGTGT TGAAAAAAAT
ATAAACGAAA CTGTTAAATG GTATCGACTT GCGGCGGAAG GTGGTTCAGG TGCTGTGAGT
TACGTCCTCG CATCAATGTA CTATTACGGT ACTGATATAC CTAAAGACTT GGCGCAAGCA
GTAAAGTATT TTTCTAATGC CGCGAACTTA AATTATGCTG ATGCCCAGTA CACCATGGCT
TTGTTGTATG CCAGAGGTGA AGGTGTTGAT GTAGATACTC AAAAGTCCAT GGAATTATTG
TTAGCCGCTG CCGAACAAGA ACTTGTTGAT GCACAATTTT TCCTAGGTGA GATATTTCGT
ACTGGAGAGT GGGGGGACAA GGACCCTAAA GCTTCATGTC GTTGGCATCA ATTGGCTGCA
GATCAAGGTA ATTTCAATGC ACAATTTAGA GTTGGACTTT GCTTCTATAC TGGAAAGGGT
AAGCCGCTAA ATTATGAGGA AGCTGTTAAG TACTTTCAGC TTGCGGCTGA GCAAGGGCAA
AATAATGCGC AGTATCTCTT AGGTTTAATG TATACAACAG GTATGGCTGG CTTATCGATA
GATTATGTTG AAGCTAGGAA ATGGCTTATT TTATCCGCAG AGCAGGGAAA TGTTAAAGCT
AAAGAAAAAT TAGAAAATAT GCGATAA
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| Protein sequence | MKKFICFILM CIASFNCYSS VEHAELAMNN GDYVTAFEII ESLAGEKNHE PINYLANFYD
EGLVVDMDQQ KAVMLYKQAA ELGNIKAQFN LGLSYYGGQG IDINYELAFE WLLKTAKQGF
EPAYDVVGSM YSKGQGVEKN INETVKWYRL AAEGGSGAVS YVLASMYYYG TDIPKDLAQA
VKYFSNAANL NYADAQYTMA LLYARGEGVD VDTQKSMELL LAAAEQELVD AQFFLGEIFR
TGEWGDKDPK ASCRWHQLAA DQGNFNAQFR VGLCFYTGKG KPLNYEEAVK YFQLAAEQGQ
NNAQYLLGLM YTTGMAGLSI DYVEARKWLI LSAEQGNVKA KEKLENMR
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