| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2436 |
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| Symbol | |
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| ID | 4018935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2901927 |
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| End bp | 2902799 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956463 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_563439 |
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| Protein GI | 91793788 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AATTGCAGAA AGTCTTGGCC CGTGCAGGCC ATGGCTCCCG TCGTGAGATG
GAGGCATGGA TTGCTGCAGG CCGAGTTAGT GTAGACGGTG AAATTGCAAC CTTAGGTGAT
CGCGTTGAAG TTGACGCTAA AATTCGCATC GATGGTCGCA CAACTTCCAT TAAAACCGCG
GATGATATGA TCTGTCGTGT TTTGGCTTAC CACAAGCCAG AAGGCGAGAT CTGTAGCCGT
AAAGATCCAG AAGGTCGTCC AACGGTATTT GAGCGTCTAC CTAAAATTCG CGATTCTCGC
TGGGTTGCAG TAGGCCGTTT GGACATTAAC ACCTCAGGCT TGTTGTTATT CACCTCTGAT
GGCGATCTTG CCAACCGTTT GATGCACCCA TCCAACGAAG TTGAGCGTGA ATATGCGGTG
CGTACCTTTG GTCAAGTGAC TGATGCCAAC GTGCAGTCAT TGCGCACAGG CGTGATGCTT
GAAGATGGCC CAGCGCAGTT TGATACCATC AAGCCTGCGG GCGGTGAGGG GATTAACTCT
TGGTGGCATG TGACCCTTAA AGAAGGCCGT AACCGCGAGG TTCGACGTCT GTGGGAATCT
CAAGAAATCC AAGTGAGTCG TCTTATCCGA GTGCGCTATG GCATGGTTGA ATTACCTAAG
ACATTGCCTC GTGGTGGCTG GATTGAGCTG CCATTAGATC AAGTTAACTA CTTACGTCAG
TTAGCGGGTC TAGAAGCGGA AACTCGCAGT ATGCTAGGTT CTGATAAGCA CAGTGTTGCT
CGCTCTAAAG TGAAGAGTTC AAAAATTCGC CGTGCAGTGC AAAAGCATAA AGTGATTTCT
AGCCGAGCTA AGCCAAGCCG TCAGCGGGAC TAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREM EAWIAAGRVS VDGEIATLGD RVEVDAKIRI DGRTTSIKTA
DDMICRVLAY HKPEGEICSR KDPEGRPTVF ERLPKIRDSR WVAVGRLDIN TSGLLLFTSD
GDLANRLMHP SNEVEREYAV RTFGQVTDAN VQSLRTGVML EDGPAQFDTI KPAGGEGINS
WWHVTLKEGR NREVRRLWES QEIQVSRLIR VRYGMVELPK TLPRGGWIEL PLDQVNYLRQ
LAGLEAETRS MLGSDKHSVA RSKVKSSKIR RAVQKHKVIS SRAKPSRQRD
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