| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2420 |
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| Symbol | |
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| ID | 4018918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2881243 |
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| End bp | 2882490 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637956447 |
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| Product | tetratricopeptide region |
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| Protein accession | YP_563423 |
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| Protein GI | 91793772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0369849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAG TTAACCAAAT TGCTAGCGTA CTAATACTCT CTCTTTGTGG TGGCGCATTT
GTGTCATCCA GCGCGTTTGC TGCTGCAAAT TGTGAAATTG ATAAACGTCA GTCTAAAGCC
GTCGGCGAAA GTGTCGGTAA AAAGGTGCAG AAGTCTTTTG AGGCTTACAC TAATGGTGAA
CTGGATAACG CCATAGGCCT TTTGCTTGAA GTCAATCCTA AAGGCGGTTT TGACAAAGCC
TATGTCGATC GTATGCTTGG CAACTTTTAT GCCGAAAAAG GTCAGATGAA AACTGCAGTT
AAGTACCTTA AAACTGCTGT AGAAGCTGAT ATTTTAGGTG GTGTAGACCA CGCAGGTACC
ATGCGTCTTT ATGCTGATTT ATTACTTCAA GAGAAGCAGT TTAAAGAATC TATTCCTTAC
TACTATAAGT GGATGGAATT TACCTGTAAG TCAGATGCAC AGACTTATCG TCGTATCGGT
ATTGCCTATA GCGAGCTTAA GGATTGGAAC AAGGTGCTGC AGGTTGCAGA TAAAGGATTA
TCTTTATCTA CTGAGCCTGA TAAAAGCCTT TACCAAATGA AATTAACTGC ATACTTCAAT
CAAAAGAAGT ATAAAGATGC AGTTAAGGTT CTTGAGGTTA TGGTGCCCTT GTTCCAAGAC
GATAAACGCC TTTGGGTTCA GCTAGCTCAG TTTTATCTGA TGACAGAAGA CTATGATAAA
GCCTTAGCGA CCTATGACTT ATCTTATAAG AATGGTTTCC TTGAGACTGA CAGTAACATT
ACGCGGTTAT CGCAGTTATT GGCGCAAAAA GGATCACCTT ATAAAGCAGC AGTCATTTAT
GAGAAGCATA TGAAATCAGG TTTAATTAAA GAATCTGAAA AAACACTTTC GACTCTGGCC
GGTTTTTTCC AGAATGCGAA AGAGTTTAAA CAAGCTGCTC ATTATTATGG TAAAGCTGCT
GTTTTAGGCC GCGATGGTGA ATTATACTTA AAGCAAGGTC GTTTATTATC TTTAGATGAG
AATTACTCTG CAGCCATTCC AGCACTTAAA AAGGCATTGG ATGCGGGTCT TAAGCACCCT
GGTGAAGCGC AATTTGAATT GGCATTGGCT TATTTGAGTC AAAAGAAATA CAAAGCTGCA
TACCAGAGAG CCGTTCTTGC TGCTAAAGAC AAGAAAACTG AACGTAGTGC CAACAGCTAT
ATTGCTTATA TAAAAGAGAA AGCTCGGATA TATAACATAT CTTTGTGA
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| Protein sequence | MRKVNQIASV LILSLCGGAF VSSSAFAAAN CEIDKRQSKA VGESVGKKVQ KSFEAYTNGE
LDNAIGLLLE VNPKGGFDKA YVDRMLGNFY AEKGQMKTAV KYLKTAVEAD ILGGVDHAGT
MRLYADLLLQ EKQFKESIPY YYKWMEFTCK SDAQTYRRIG IAYSELKDWN KVLQVADKGL
SLSTEPDKSL YQMKLTAYFN QKKYKDAVKV LEVMVPLFQD DKRLWVQLAQ FYLMTEDYDK
ALATYDLSYK NGFLETDSNI TRLSQLLAQK GSPYKAAVIY EKHMKSGLIK ESEKTLSTLA
GFFQNAKEFK QAAHYYGKAA VLGRDGELYL KQGRLLSLDE NYSAAIPALK KALDAGLKHP
GEAQFELALA YLSQKKYKAA YQRAVLAAKD KKTERSANSY IAYIKEKARI YNISL
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