Gene Sden_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2417 
Symbol 
ID4018915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2878373 
End bp2878651 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content46% 
IMG OID637956444 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_563420 
Protein GI91793769 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.356226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAAG CAACGGCGCG TCATCTTTTA GTGAGCACTC AGGTTGAGTG TGAAGACTTA 
AAGCAACAAA TTATTGCGGG TGCAGATTTT GCACAAATTG CTCGTGAGCA TTCATCTTGT
CCATCGGCTG CCGAGGGCGG TAACTTGGGC TCATTCGGTC CTGGCATGAT GGTGCAAGAA
TTTGATGCGG TTGTCTTTAG TGCTCCACTA AACGAAGTGC AAGGCCCTGT AAAAACTCAA
TTTGGCTACC ACTTATTAGA AGTGACTCAA AGAGGCTAA
 
Protein sequence
MVQATARHLL VSTQVECEDL KQQIIAGADF AQIAREHSSC PSAAEGGNLG SFGPGMMVQE 
FDAVVFSAPL NEVQGPVKTQ FGYHLLEVTQ RG