| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2398 |
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| Symbol | |
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| ID | 4018896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2850398 |
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| End bp | 2851321 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956425 |
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| Product | S6 modification enzyme RimK |
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| Protein accession | YP_563401 |
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| Protein GI | 91793750 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCGCG AAAATTTAGC TTACTTGGAG CCTCCATTGA GGATCGCTAT TCTATCTCAA
GGCCCGCAAC TCTATTCCAC TAAACGTCTG GTGGAAGCCG CACAGGCACG GGGTCATGAT
GTTCACATTA TCAATCCGTT AAAGTGTTAC ATGAACATTA ATATGCGCCA ACCTAGCATT
CATATTGCCG GTAAAGAATT GCCGCAATTT GATGCCGTCA TTCCGCGCAT TGGAGCCTCT
ATCACTTTTT ACGGTTCGGC CGTGCTACGC CAATTTGAGA TGATGGGTGT GTATACCATC
AATGATTCAG TGGGCATTTC TCGCTCACGA GATAAGCTGC GCTCGATGCA ACTATTGTCC
CGCAAGGGCA TAGGCTTACC TATCACAGGG TTCGCCAATA AACCCAGCGA CATCCCCGAT
CTTATCGACA TGGTTGGCGG CGCGCCCTTA GTGGTTAAAT TGCTCGAAGG CACCCAAGGG
ATAGGGGTGG TGCTCGCTGA AACCCGCAAG GCGGCAGAAA GCGTGCTTGA AGCCTTTATG
GGCCTTAAAG CCAATATTAT GGTGCAGGAA TACATAAAAG AAGCCAATGG TGCCGATATC
CGCTGCTTTG TCTTAGGCGA TAAGGTTATA GCAGCCATGA AACGCCAAGC TAAGGCCGGT
GAATTTAGAT CTAATCTGCA CCGCGGCGGC ACTGCGACCT TAGTAAAATT ATCCCCAGAG
GAGCGCACCA CAGCGATTCG TGCGGCTAAA ACCATGGGGC TAAGTTTGGC TGGGGTTGAT
TTATTACGCT CAAACCATGG CCCTGTGGTG ATGGAGGTGA ACTCATCTCC AGGTCTTGAA
GGGATTGAAG CGGCAACGCA AAAAGATGTG GCCAATGCCA TTATCGAATT TATCGAAAAA
AATGCTAATA AAGCCAAGAG CTAG
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| Protein sequence | MMRENLAYLE PPLRIAILSQ GPQLYSTKRL VEAAQARGHD VHIINPLKCY MNINMRQPSI
HIAGKELPQF DAVIPRIGAS ITFYGSAVLR QFEMMGVYTI NDSVGISRSR DKLRSMQLLS
RKGIGLPITG FANKPSDIPD LIDMVGGAPL VVKLLEGTQG IGVVLAETRK AAESVLEAFM
GLKANIMVQE YIKEANGADI RCFVLGDKVI AAMKRQAKAG EFRSNLHRGG TATLVKLSPE
ERTTAIRAAK TMGLSLAGVD LLRSNHGPVV MEVNSSPGLE GIEAATQKDV ANAIIEFIEK
NANKAKS
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