| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2356 |
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| Symbol | |
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| ID | 4018850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2801829 |
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| End bp | 2803553 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956379 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_563359 |
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| Protein GI | 91793708 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.59419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACA CTTTTTTTCG TTCCATGACT TGGCTGCACA CTTGGGTTGG ACTGTTAGTT
TGCTGGGTGT TATTAATTAT TTTCTATGCA GGAAGCTTAA GCTATTTTCG CCATGATATT
TCAATCTGGA CAGCGCCTGA GCTTCATCAA GGGGTATTGC AGCAGCAAAC GCCGCAAAAC
CTCAAGCCAC AACTGGATAA AGTGCAGCAA TTGCTGCAAC AAAAAGCCGC CAATGCCGAT
AGCTGGTTTA TCTTTCTGCC AAGCAGTCGC CATCCTTACT TAAGTTATGC CTGGCAGGAG
CTCGCCCCAG AACCTGGGCA AAGAGGAACA TTAATCGAGG AGGTCCTTAG CGATGACAAT
CAGACTGTCA TCGCTGATAA GCGCAGCTCC CGTGGTGGTG ATTTCTTCTA CCGTTTACAT
TTCGACTTAC ACTATCTCCC TGTGATTGCC GCCCGCTGGC TGGTGGGTCT GTGCAGCTTA
TTTATGCTGT TGGCGCTGCT CAGCGGTATT GTTATCCATA AACGTATCTT TAAAGACTTC
TTTAGCTTTA GGGCCAACAA AGGGCCGCGC TCTTGGCTCG ATGGTCATAA TGTCACCGCC
GTACTGGCAC TGCCTTATCA CTTGATGATC ACCTACACCG GCCTTGTGAC CTTTATGATG
ATGTTTATGC CTTGGGGAAT AATGACAGCC TTCGATGGCA AAGATAGCAA TGAGAAAGTG
CGAGCATTCA GAAGCCAAGC CGCCAGCGAG CAAGTGCAAA CCTTTGAGCC AATAAACTTA
GGCTCAGAAG ATGTAAATTC AGCGCAGCTT AACCGTCAAC AAGTGGACCA AAGTTATGTA
TTAAGCGAGC TATTGCCATC GATTGAGCGA CACTTAGCCC ATAAGCCCAT CAAGCAAATA
GTCATAAGCC AGCCCCAAAG CCCAGATGCC AAAGTTAACG TTTACGCCGA TCTTGCCGAA
GAAGTCACAG ATAAGCGTAT TCCTTGGGTT CTCAATCCCT TTACTGGTGA GCTCATTAGC
CAGCCACTAG AGGAAGTGTC AGGCAGCAAG GCGACCCATG ACACCTTTAT GGCGCTGCAT
ACCGCGCGCT TCTCTGAGCC CGTACTTCGA ATAATATTCT TTATTTTCGG CCTGATGGGC
TGCGCCATGA TAGCCACAGG TACTGTGCTT TGGGCAGTGA AAATCCGCCA GAAACAAGCT
AAGAACATGG CCCAAGGCCA AAAAGCCAGC TTAGGGCTGC GCTTAGTTGA AGGGTTAAAC
TTAACCTTTA TAGCCGGCCT GCCCCTTGGC ACAGCTGCTT TTTTCTATGC GAATCGCTTA
CTTGCCCCGC AGCTTGAAGG CCGAGCGCAA TTAGAAGTTG ATAGCTTTTT TATCAGCCTC
GCCATGGTTG GCTTGTGCGC CCTGATTAGC ACAGGGCTTC ACATGTGGCG CGCTATATTT
GCCTTGGCTG CACTGGCCTT TGCCATGTTG CCACTACTCA ATGGTTTTAC CTCAAGCCAA
CACCTTTTCG ATAATATCGC CACCGGGCAA TGGGTGTTAG TAGGTTTCGA TCTGATGAGC
CTCATTTTCG CTCTCGCACT AGGTTTTGCA GCAATCAAAT GCCACAACAA AGCCGCAGCA
ACGGTCAACA ACACTAAGAA AATGCGCAAT GTAAATAAAA TAAACGCCCA AAATACGTCG
AGTAAAGATG TGAACATCAG CACCGCCGCC CAAGGAGGTC AGTAA
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| Protein sequence | MKDTFFRSMT WLHTWVGLLV CWVLLIIFYA GSLSYFRHDI SIWTAPELHQ GVLQQQTPQN
LKPQLDKVQQ LLQQKAANAD SWFIFLPSSR HPYLSYAWQE LAPEPGQRGT LIEEVLSDDN
QTVIADKRSS RGGDFFYRLH FDLHYLPVIA ARWLVGLCSL FMLLALLSGI VIHKRIFKDF
FSFRANKGPR SWLDGHNVTA VLALPYHLMI TYTGLVTFMM MFMPWGIMTA FDGKDSNEKV
RAFRSQAASE QVQTFEPINL GSEDVNSAQL NRQQVDQSYV LSELLPSIER HLAHKPIKQI
VISQPQSPDA KVNVYADLAE EVTDKRIPWV LNPFTGELIS QPLEEVSGSK ATHDTFMALH
TARFSEPVLR IIFFIFGLMG CAMIATGTVL WAVKIRQKQA KNMAQGQKAS LGLRLVEGLN
LTFIAGLPLG TAAFFYANRL LAPQLEGRAQ LEVDSFFISL AMVGLCALIS TGLHMWRAIF
ALAALAFAML PLLNGFTSSQ HLFDNIATGQ WVLVGFDLMS LIFALALGFA AIKCHNKAAA
TVNNTKKMRN VNKINAQNTS SKDVNISTAA QGGQ
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