| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2353 |
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| Symbol | |
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| ID | 4018847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2797650 |
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| End bp | 2799953 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956376 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_563356 |
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| Protein GI | 91793705 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC AAAAAACGCC GCCAATGATA GCGCTGACGC CGATAGCATT AGGGCGGACT
GCACTGAGCC AAACTGCTCA GGCTCAAATA GCGCCAAGCT TAAGAGAGCG GCTTAAATAT
TGGCAAGAGC TGCGTTTACT CACGCCGCTT GACAGGCACT TTGCCTTGTC CCTTTGTGAT
ATTGAAGGTT TGGATAACCA CAGCTCAGAA GCTGAGCTAT TTATGCTCAT CTGCGCGCTG
TTAAGTAGGC AGTTATCAAA TCAGCACAGC TGCTTAGTGC TGTCGCAAAT TGACTTAGCT
AACCCTATGA TGGAAGAGTG CTACCGCGCT CCCGCCTCTT GCAGCATTAA CTTAAGCTTA
ACTGAGCTTG AACATCAACT CAGTCAATTT AGCGCGGTAG GCCAAGCCGG CGACAATACC
CCGCTAATCT TAGATACAGG CTGCCTGTAC TTAAATAAGT ATCACTTTTT TGAGACCCAC
GTTGCCCATA AACTCAATCG ATTAGCACAA ACCGAACTCA TAGCGACTAG CAATGCGTTT
GATGCAGGCA CGCTTAATCA AGTGCGTCAG CAACTGGATT GCCTGTTCCC CGCCGCTGAA
AATGCGCAGA TAGACTGGCA AAAAGTCGCC ACCGCCACCG CGCTCACCAA GGCCTTAGCT
GTCATCACTG GCGGCCCTGG TACAGGTAAA ACCACTACCG TGACTAAGTT GCTACTGTTA
TTGCAAACTC AGTCAGCAAT GAACATCAAA TTAGTGGCTC CGACTGGAAA GGCGGCGGCG
CGCCTCAGTG AATCCATTAA AGACTCGAAA GCTAAGCTGC ATGACTTTCT TTGCGCCCAG
CTTTCCCAGC AACTTTCCTT GCAACTTAAG CAGGCTGAAA GCCCTCTTGC TTCAACGTCG
TCAACGCAAA GTTCACCGCC AAAGAAACAG GCTCAAGGGC AGATGAGCCT AGACTTTGAC
CATACTGTTG TTGAAAACCA AACCGGCGCT GAAAACCAAA CGGTCGCTGA CATCCAAACT
GAGAATGTGA ACCCAGACTC TAGCAGTCTG TTAGCCCTTA AGCAGTTAAT CGCCTCACTT
AGCCTTATTC CAGAAGAGGC CTCGACCCTG CACCGTTTAT TGGGGGTTAT CCCTAATTCC
CACAAGTTTA GGCATGATGA GCATAATCCC CTGAGGTTAG ATTTATTGGT GGTGGATGAA
GCCTCCATGG TGGATTTACC TATGATGCAC AAATTGTTAA GTGCCCTACC TAAAGATGCG
CGGCTGATTT TACTTGGGGA TCAAGACCAA TTGGCCTCAG TGGAAGCCGG CGCCGTGTTA
GCGGATATTT GCGCAGGACT TAAGGCGCCA GCCTCGAGTG CGGCGCAATG GCAGATGCGT
TATTCTCATG AACAAGCTCT ATTGCTTGAG GCATTAACAG GGGAAAAACT GACAAGATAT
ATTCATCCAC AAGCCAGACT TGGGGATAGC TTGTGCATCT TGTTTCACAG CCACAGATTT
AAAGGCGATG CCGGCATTGG TCTTTTAGCC GCAGCGGTGA ATCACGCCGA TATTAAGGCC
ATCAGACAAG TGTGGCAGCA ACAACATCAG GAGCTTAACT GGTTTGAGCA TCAAGCTGAC
TCAAATTCAG CTCAAGGAAA AGACGCCTTG CTGGCACTAT CCGTGTCTGC CTATGGTGAT
TATCTAAGCT TAATTGCAGA CAATAAGCGC CAATTTGAGA TAACTGATGC CAGTGCGCTT
CATAGCCCCA AGACCATTAT CGACAGCTTT AATCAATACC GGATTTTATG CGCCATGCGC
GCCGGTGAAT TTGGTGTCGA TGGCATTAAT GCTGCCCTGA CCCAAGCGCT AAAACAGCGC
AAACTTATTG ACCCCAAACA AGAGTTCTAT CTTGGAAGGC CCATTATTAT TGCCAGTAAC
GACTACAATT TAGGGCTTTT CAATGGCGAT ATCGGGCTGA TTTTACAAGA CAAAGATCAA
CCCACTCGCT TGATGGCACA CTTTATCAAG GCCGATGGCA GCGTGCTTAA AGTTCAGCCC
GCGCGCCTGC CAAGTCACGA TACCTGTTAT GCCATGACAG TGCATAAGAG TCAGGGCAGC
GAATTTGCCA AGGTGAGTTT TGTGCTGCCG CCAAAGCCCA GTACAGCCCA ATGGCAATTG
CTGACCAAAG AACTGCTCTA TACCGCGATA ACCCGCGCTA AAGCACAATT TTATTGCTTG
GGAAGCCAGC CAGTGTTTGA GCGAGCCAGC CGTCAAGTGA CCTTAAGGGC ATCGGGACTT
GCGCGTCGCT TATGGGATGA ATGA
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| Protein sequence | MTKQKTPPMI ALTPIALGRT ALSQTAQAQI APSLRERLKY WQELRLLTPL DRHFALSLCD
IEGLDNHSSE AELFMLICAL LSRQLSNQHS CLVLSQIDLA NPMMEECYRA PASCSINLSL
TELEHQLSQF SAVGQAGDNT PLILDTGCLY LNKYHFFETH VAHKLNRLAQ TELIATSNAF
DAGTLNQVRQ QLDCLFPAAE NAQIDWQKVA TATALTKALA VITGGPGTGK TTTVTKLLLL
LQTQSAMNIK LVAPTGKAAA RLSESIKDSK AKLHDFLCAQ LSQQLSLQLK QAESPLASTS
STQSSPPKKQ AQGQMSLDFD HTVVENQTGA ENQTVADIQT ENVNPDSSSL LALKQLIASL
SLIPEEASTL HRLLGVIPNS HKFRHDEHNP LRLDLLVVDE ASMVDLPMMH KLLSALPKDA
RLILLGDQDQ LASVEAGAVL ADICAGLKAP ASSAAQWQMR YSHEQALLLE ALTGEKLTRY
IHPQARLGDS LCILFHSHRF KGDAGIGLLA AAVNHADIKA IRQVWQQQHQ ELNWFEHQAD
SNSAQGKDAL LALSVSAYGD YLSLIADNKR QFEITDASAL HSPKTIIDSF NQYRILCAMR
AGEFGVDGIN AALTQALKQR KLIDPKQEFY LGRPIIIASN DYNLGLFNGD IGLILQDKDQ
PTRLMAHFIK ADGSVLKVQP ARLPSHDTCY AMTVHKSQGS EFAKVSFVLP PKPSTAQWQL
LTKELLYTAI TRAKAQFYCL GSQPVFERAS RQVTLRASGL ARRLWDE
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