| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2326 |
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| Symbol | |
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| ID | 4018819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2749757 |
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| End bp | 2751532 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956348 |
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| Product | peptidase M61 |
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| Protein accession | YP_563329 |
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| Protein GI | 91793678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATC ATATTGTCCC TCTCGATCCT AAGGCGCATC TTTTTCACGT CACTCTCACT
TTAGACAATG CCCAGAAGGC CCAAGAGTTT AGCTTGCCTG CCTGGCTGCC TGGCAGTTAT
ATGATAAGAG ACTTTGCCAG AAATATAATA GACATTAGCG CGTTGGATGA AAACAACCAA
GTCATTGCGT TGACTCAACT GGATAAACAG CGCTGGCGCG CCGCCAATAC CAGTCCTAAG
TTAACCCTAA GCTATCAAGT CTATGCTTGG GATTTATCGG TACGCTCGGC TCACCTTGAT
ATGAGTCATG GTTTTTTCAA TGGCAGCAGT GTATTTCTAA GTGTTACAGG GACTGAGGAT
AACCCGAGCA CAGTCACCAT AGCCAAACCT CAAGACGCGT TACTGCAACA CTGGCAACTT
GCCACCAGCC TTAAACGCAT GAGCGGTGAT GAATTTGGCT TTGGCGATTT TAGCGCCGAG
AATTATCAAG ATTTAATTGA TCATCCGGTG GAGATGGGTG AACTCATCAT AGGACAATTT
GATGCCTGTG GCGTGCACCA CGATGTGGTA TTAAGCGGTG CAAGCCGGGT TAATATGGCA
AGATTGTGTC AAGATCTCAA AACCATTTGT GAATACCAAA TAAACCTTTT TGGTGGCCAA
GCGCCCTTTG AGCGCTATGT GTTTATGACA CGCGTGCTTG ATAATGGTTT TGGCGGCCTC
GAACACAAGG CATCGACAGC ATTAATGTGC TCACGCAAAG ATCTTCCCCA AAGTCTCGAT
GCTAAAGTGA ATAAAGATTA TCGCACCTAT CTGTCCCTTT GCAGTCACGA GTATTTCCAC
AGTTGGAACG TCAAGCGCAT CTTGCCTAAG GAGTTTATTC CCTTCGACTT AAGCCAAGAA
AGCTACACCA ATCAACTGTG GGCCTATGAG GGTATTACCT CCTATTTTGA TGACTTTATA
ACCTATCGCG CAGGCTGCAT AGATGCCAGC AGTTATCTAG AGCTACTGAG TGCCACCATG
ACCCGAGTTT ACCGTGGTCA GGGGCGCTTT AAACAAAGCT TAAAAGCATC AAGCTTTAAT
GCTTGGACCA AGTTTTATAA ACAAGATGAA AATGCTGCCA ATGCCATTGT GAGTTACTAC
ACCAAAGGCG CGCTATTTGC CCTTATGCTG GATTTAACCC TGCGCATCGA ATCTAAAGGT
AAGTACTCAC TGGATAATCT GATGCAGCAA TTATGGCAAC ACCATGGCTT AACCGGCGTA
GGCACAGATG AAAACTCACA TAAGGCGATT ATTGAGCAGC TCCTTGGGCG CAACTGTGAT
GAGCTATTCA GCTATTTAGA CAACACTGAA GATTTACCCC TTGAAGCGTT ACTGGCCAAA
GTCGGAATTG AGATGACGCT GCGCGCCAGT GAAGGCGGCA ATGACCTCGG TGACAGCCTG
AATGATGGCA AGCCTAGAGG CTATAAGATT GGCTTTGGTG CCAAATTTAA AGCTGAAGCC
TCAGGATTGA CCATTATCAG CGTCACCCAA GGTAGCCCCG CCCATGATGC AGGACTCAGC
GCGGGCGATG TACTTATTAG TTGTGACGCA TTAAAAGTCA CCGCTGAATT TGAACGTCAG
CTTCAAGATC ATCAACTGGG TGAGCGCCTC ACCTTGCATT GGTTTAGACG CGATGTGTTG
ATGCAAGGTC AACTGACGCT TCAAGCCCCC ATGCTGGATA CTGTGGCGCT GCGCATTAGC
GACCCAGATG CGGCAAAAAT ATGGTTAAGC TACTGA
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| Protein sequence | MHYHIVPLDP KAHLFHVTLT LDNAQKAQEF SLPAWLPGSY MIRDFARNII DISALDENNQ
VIALTQLDKQ RWRAANTSPK LTLSYQVYAW DLSVRSAHLD MSHGFFNGSS VFLSVTGTED
NPSTVTIAKP QDALLQHWQL ATSLKRMSGD EFGFGDFSAE NYQDLIDHPV EMGELIIGQF
DACGVHHDVV LSGASRVNMA RLCQDLKTIC EYQINLFGGQ APFERYVFMT RVLDNGFGGL
EHKASTALMC SRKDLPQSLD AKVNKDYRTY LSLCSHEYFH SWNVKRILPK EFIPFDLSQE
SYTNQLWAYE GITSYFDDFI TYRAGCIDAS SYLELLSATM TRVYRGQGRF KQSLKASSFN
AWTKFYKQDE NAANAIVSYY TKGALFALML DLTLRIESKG KYSLDNLMQQ LWQHHGLTGV
GTDENSHKAI IEQLLGRNCD ELFSYLDNTE DLPLEALLAK VGIEMTLRAS EGGNDLGDSL
NDGKPRGYKI GFGAKFKAEA SGLTIISVTQ GSPAHDAGLS AGDVLISCDA LKVTAEFERQ
LQDHQLGERL TLHWFRRDVL MQGQLTLQAP MLDTVALRIS DPDAAKIWLS Y
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