Gene Sden_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2325 
Symbol 
ID4018818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2749224 
End bp2749577 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content46% 
IMG OID637956347 
Producthistidine triad (HIT) protein 
Protein accessionYP_563328 
Protein GI91793677 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGGCCG AAGAAACCTT ATTTAGTAAA ATTATTCGCC GTGAAATTCC TGCCGATATT 
TTATATCAAG ATGAATTAGT CACGGCGTTT CGCGATATCC AGCCTAAAGC CCCGACCCAT 
ATTTTGATTA TTCCAAATCA CTTGATCCCA ACGACCAATG ATGTGAAGTC ATCGGATGAA 
TTGGCTTTGG GGCGTATGAT TACCGTGGCG GCCAAGTTAG CCTCTGAAGC GGGCATTGCA 
AAAGACGGCT ACCGACTCAT TATGAATTGC AATCAGCATG GCGGCCAAGA GGTGTACCAC 
ATTCATATGC ATTTAGTGGG CGGTAAGCCC TTGGGTCCTA TGTTGTCTGT GTAG
 
Protein sequence
MMAEETLFSK IIRREIPADI LYQDELVTAF RDIQPKAPTH ILIIPNHLIP TTNDVKSSDE 
LALGRMITVA AKLASEAGIA KDGYRLIMNC NQHGGQEVYH IHMHLVGGKP LGPMLSV