| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2315 |
|---|
| Symbol | |
|---|
| ID | 4018807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2740716 |
|---|
| End bp | 2741264 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637956337 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_563318 |
|---|
| Protein GI | 91793667 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCAA AGCAACTTCT GTTAACCCGT CAGTCCAGCC CCCGCCTTAT GGCCCCCGCC
CCGAACGAGC AAGAATTAAC ATTTATTCTG GATGCGGGCG CAAGAGTGCC TGATCACGGC
AGTTTAACCC CTTGGGAGTT TATTATTGCC GTCGATGAGG GCCTAGAACG ACTTAGCGCT
ATCTTTGTTG CTGCTGCGAC AGCCAATGGT GCCGATGACG CTGCCATAGC TAAAGCAGGC
ATGACCTCTG CACGAGCGCC TATGGTGATA ACTGTGGTGG CAAAATGCCA ACAACACGCC
AAAGTGCCTA TCATAGAGCA ACAGTTAGCC GCAGGTTGTG CCACTATGGC CATGCAGCAA
GCGGCTTTTA GTTTAGGTTT AGGCGCTGTG TGGCGCACTG GGGATCTGGC TTTTAGTCAG
CAAGTTCATC AAGCGTTAGG GTTAGGGGAG TTAGATCAAA TCGTTGGATT TCTCTATATC
GGCACGCCGA CAGTGACAGC ACCTATCAAG GCACTAAAGC CCGGCAAGCA ATTTAGCCGC
TATATTTAA
|
|---|
| Protein sequence | MDAKQLLLTR QSSPRLMAPA PNEQELTFIL DAGARVPDHG SLTPWEFIIA VDEGLERLSA
IFVAAATANG ADDAAIAKAG MTSARAPMVI TVVAKCQQHA KVPIIEQQLA AGCATMAMQQ
AAFSLGLGAV WRTGDLAFSQ QVHQALGLGE LDQIVGFLYI GTPTVTAPIK ALKPGKQFSR
YI
|
|---|
| |