| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2313 |
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| Symbol | |
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| ID | 4018805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2738911 |
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| End bp | 2740098 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956335 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_563316 |
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| Protein GI | 91793665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAT TCCCCCCCAA ACTAGCCACT CAGATTGTGA GTGCAGGCCG CGATAAAAAA
TTTACTCAGG GGGTGATTAA TCCCCCTGTG GTCAGGGCAT CCACTGTGGT GTTTGACACC
TTAGATGAAA TGCAGTTTGC CATCAAAAAT AAAACCAATG GCACACTCTT CTATGGCAGA
CGCGGCACGA GTACTCATTT TGCGTTCCAG CAAGCCATCA GCGAGCTTGA AGGTGGTGTT
GGTACTGCGC TATACCCTTC GGGTGCGGCG GCCATTAGCG CAGCATTACT GTCCTTTCTT
AAGAGTGGCG ACCACTTACT TATGGTTGAT AGTGCCTATG AACCCACCCG TGCCTTGTGT
GATAACCTGT TGGCTGGGTT CGGTATTTCA ACCAGCTACT ATGATCCCAT GATAGGCGCC
GGCATTAGCG AGCTTATTCA ACCCAATACC AAGGTGATAT TTTTAGAATC CCCAGGTTCT
ATCACTATGG AAGTTCAAGA TGTTCCCAAC ATATGCCAAA TAGCACAACA ACATGGCATC
ATCACCCTAC TTGATAACAC TTGGGCCTCG CCCATCAATT GTCGCCCGTT TGATATGGGT
GTGGATGTTT CTATCCAAGC GGCAACCAAA TATATCGTGG GACATTCCGA TGTGATGCTG
GGCACGGCCA CTGCCAATGA GAAACACTGG CCAAAATTAA GAGAGCAAAG TTACCTTATG
GGCCAAACCA CCTCCCCTGA CGATGTTTAT TTGGCGGCAA GAGGACTGCG GACCTTAGGG
GTGCGCATGG CGCAACATGA GAAGAATGCC CTCGAAGTCG CGCTTTGGAT ACAGGCGAGA
GCCGAAGTCG ATCATATCCG CCACCCCATG TTTGATACTT GCCCAGGACA TGAGTTTTTT
AAACGTGATT TTAGCGGCGC GAACGGCTTA TTCTCGTTCG TATTAAAGCA AGGTACCCCT
CAAGCCCTAA AAGCCTTTGT AGAAGGTATG CAGCACTTTA AAATGGGCTT TTCTTGGGGG
GGATTTGAAA GCCTTATTCT ATCTGTGCCT GGGATAGATA AAATTCGGAC TGCCACTGCT
TGGGATAAGA GCAAACCTTT ACTCAGATTA CATGTGGGTC TTGAAGACCC ACAGGATTTG
ATTGCCGATC TTGACCGCGC GTTTGCAAGA TACCATCAAG CAGAATAG
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| Protein sequence | MKEFPPKLAT QIVSAGRDKK FTQGVINPPV VRASTVVFDT LDEMQFAIKN KTNGTLFYGR
RGTSTHFAFQ QAISELEGGV GTALYPSGAA AISAALLSFL KSGDHLLMVD SAYEPTRALC
DNLLAGFGIS TSYYDPMIGA GISELIQPNT KVIFLESPGS ITMEVQDVPN ICQIAQQHGI
ITLLDNTWAS PINCRPFDMG VDVSIQAATK YIVGHSDVML GTATANEKHW PKLREQSYLM
GQTTSPDDVY LAARGLRTLG VRMAQHEKNA LEVALWIQAR AEVDHIRHPM FDTCPGHEFF
KRDFSGANGL FSFVLKQGTP QALKAFVEGM QHFKMGFSWG GFESLILSVP GIDKIRTATA
WDKSKPLLRL HVGLEDPQDL IADLDRAFAR YHQAE
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