| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2309 |
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| Symbol | |
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| ID | 4018801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2734677 |
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| End bp | 2735516 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956331 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_563312 |
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| Protein GI | 91793661 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000228634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGG ATTTATTAAA AACCTTTTTA GAAGTTTCTC GAACCCGGCA TTTTGGCAAG
GCTGCTGAAA ACCTTTATCT GACTCGAAGC GCAGTCAGCT TTAGAGTTAA ACAGTTAGAG
GGAATACTCG GGGTTGAGTT ATTCGAGCGT TTACGTAATA ACATTCACCC GACTCCTGCA
GGTGAGCGAT TATTAGGACA CGCCGAAGCT GTGCTTACGG CGTGGGAGCG GGCTAAGCAA
GATATTTCCT TAAGTCAAAA TCATACTACT CAGCTCACTT TAGCTGCGGG TCATAATATT
TGGGATGCCT ATCTGCAGCA ACATCTGCAG CCTTTGCATT TAGGCTTGCC GGGCGCGGCC
TTAAGGGCTG AAATCTTAAC CAGCACAATA ATGACCCGGC AATTAATTGA GCGCACATTA
GATATAGCCA TTACCTTTGA GCCACCTAAA CTCGATGAGG TGGAAATCGT GCAGTTAGCT
CAAATTGAGT TAAGTTTAGT GTCAGATAAG CCGCATGCTT CATTACAAGA GGCTCAGCAA
CAGGCTTATA TTAAAGTTGA TTGGGGCACT GCCTTTAATA TCATGCATGC CCAAGAGTTT
TCGCTACTGC CTGTACCTGT GCTGCATACG AGTTCAGCGC GAATTGCATT GGATTTTTTA
CTTAACAATG GCGGCAGTGC ATTTTTGCCA AATGCGTTGA TTATTCAAGC GTTATCGGAC
AAAAAACTGA ATTTAGTTCA AGGGGTGCAA AGTATTAAAC GTACCCTTTA TGCCGCCTAT
CTTGGTAAAA GTGAGCGCTT GCTGCAGATA GAGCAAGCTA TCAGGTTACT GTCGAATTAA
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| Protein sequence | MDTDLLKTFL EVSRTRHFGK AAENLYLTRS AVSFRVKQLE GILGVELFER LRNNIHPTPA
GERLLGHAEA VLTAWERAKQ DISLSQNHTT QLTLAAGHNI WDAYLQQHLQ PLHLGLPGAA
LRAEILTSTI MTRQLIERTL DIAITFEPPK LDEVEIVQLA QIELSLVSDK PHASLQEAQQ
QAYIKVDWGT AFNIMHAQEF SLLPVPVLHT SSARIALDFL LNNGGSAFLP NALIIQALSD
KKLNLVQGVQ SIKRTLYAAY LGKSERLLQI EQAIRLLSN
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