Gene Sden_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2307 
Symbol 
ID4018799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2733608 
End bp2734093 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content45% 
IMG OID637956329 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_563310 
Protein GI91793659 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.224234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATC GAATTTTATT TGTCTGCATG GGTAATATTT GCCGTTCCCC CACAGCAGAA 
GCCATCTTTA GGGCGAAAAT ACTTAAGTAT CAGTTAGCCA CAGTAATAGA TTCTGCGGGC
ACCATAGGCT TTCATCAAGG CCATGGACCC GATAAGCGTA GTGTGGAAGC AGGGGAGAAG
CGCGGTTTAG ACTTTACCGC TATGCAGGCA CGGCAAGTGA GCGTTGAGGA TTTTGAGCAC
TTCGATCTGA TTTTGGCGGC AGACAGGTCA AATTTAATTG AACTTAAGGC AATGTGCCCA
GCATACTTAC AGCATAAATT GCAGCTGATG TTATCGTTCG CAGAACTTGG TATCGAAGAA
GTGCCTGATC CTTACTATGG TGATGGAGAA GGTTTTGAGC GGGTGCTTGA TTTGCTGGAA
GCGAGTTTAG ATGTGTTAGC ACAACAAATT CAGCGACAAC AAGCACAACT GACTAATATC
GAATAA
 
Protein sequence
MINRILFVCM GNICRSPTAE AIFRAKILKY QLATVIDSAG TIGFHQGHGP DKRSVEAGEK 
RGLDFTAMQA RQVSVEDFEH FDLILAADRS NLIELKAMCP AYLQHKLQLM LSFAELGIEE
VPDPYYGDGE GFERVLDLLE ASLDVLAQQI QRQQAQLTNI E