Gene Sden_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2290 
Symbol 
ID4018782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2715079 
End bp2715564 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID637956312 
Productthioesterase superfamily protein 
Protein accessionYP_563293 
Protein GI91793642 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0256526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA AAGACAGAGC GTTAACCTTG AGATTTTTAG CCGAGCCTGC GGATGTGAAT 
TTTGGCGGCA AGGTTCACGG CGGCGCCGTG ATGAAATGGA TTGACTTAGC AGCCTACGCT 
TGTGCTGCAG GCTGGAGCGG TAAATACTGC ATAACAGTGT ACGCTGGTGG CATTCGCTTT 
GTGCAACCTA TCCATGTGGG TAATATTGTT GAAGTCAATG CAAAGGTAAT TTATACCGGC 
ACCACCTCTA TGCACGTGGC GCTGGATGTG AGAGCAGGCG ATCCTAAAGA CAGTGAACGT 
CATCTAACCA CACATTGTAT TGTTATCATG GTGGCGGTGG ATGACGGTGG AAAGCCCAGT 
GAAGTGCCTG AGTGGATCCC CGTCGATGGC GAAGATATAA AACTCAGGGA TTCAGCACTT 
AGGCTGATGG ACATGCGTAA GCGTATTGGC GCTGAAATGG AAGCTCATGT AAAACCTGCG 
GGTTAG
 
Protein sequence
MAGKDRALTL RFLAEPADVN FGGKVHGGAV MKWIDLAAYA CAAGWSGKYC ITVYAGGIRF 
VQPIHVGNIV EVNAKVIYTG TTSMHVALDV RAGDPKDSER HLTTHCIVIM VAVDDGGKPS 
EVPEWIPVDG EDIKLRDSAL RLMDMRKRIG AEMEAHVKPA G