| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2286 |
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| Symbol | rrmA |
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| ID | 4018778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2710683 |
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| End bp | 2711531 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956308 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_563289 |
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| Protein GI | 91793638 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATACC TTTGTCCCCT GTGTGCTGGC GAATTAACTA AAGTCACTAA AACTTGGTCC
TGCTTGAAAG GGCATCAATT CGATTGCGCC AAAGAAGGTT ATGTCAATCT CTTGCCAGTG
CAAAAAAAGA ATTCAAAAGA TCCAGGCGAT AACAAGGAAA TGATGCAGGC TCGCCGGGAG
TTTCTCAATA AAGGTTATTA TCAATCATTA AGTGATGCGG TGAATGCACT GGCTTTGCGT
TATAAACCAA AGGCAAAGCA AATCTTGGAT TTGGGCTGCG GCGAAGGCTA CTACTCGAGC
CGGTTATTTG CCGCGCTTAA TCAAGACCTG CAAGAGCGCA ATCTCGATGA GGGACCATGC
TGTCAATTGC AAGGTTTGGA TATTTCCAAA ACCGCTATCC GTTATGCGGC TAAGCGCTAT
CCACAGATGT CTTTCTGTGT GGCCAGTGCC TATGAAATGC CTTTTGCTGC GGCTAGCGTG
GATCTTGCGT TAAGAATTTA TGCCCCTTCT AAAGCGGAAG AATTAGCGCG TGTCATAGCC
GGCAATGGCA TCTTGATCAC TGTCTCCCCT GGCCCTATGC ATCATTTTGC CATCAAAGAA
ATGATTTATG AGTATCCAAA GCCTCATCAG GACAGGGTGG ATAGCATAGA AGGCTTTGAG
TGTATCGATA CCCAACGTTT AGAATCTCAG ATGAGCTTAG ATAATGCTGT TGATATTGTT
CACTTTTTAA ATATGACCCC CTACTCATGG AAATTAACCC AAGAGAAAAA AGCACAACTT
GCCAATGAGG GCCTACGTTG TGAACTTGAT TTCCATATTG CTGTGTATCG GCGCATTGCC
CTTGCTTAA
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| Protein sequence | MQYLCPLCAG ELTKVTKTWS CLKGHQFDCA KEGYVNLLPV QKKNSKDPGD NKEMMQARRE
FLNKGYYQSL SDAVNALALR YKPKAKQILD LGCGEGYYSS RLFAALNQDL QERNLDEGPC
CQLQGLDISK TAIRYAAKRY PQMSFCVASA YEMPFAAASV DLALRIYAPS KAEELARVIA
GNGILITVSP GPMHHFAIKE MIYEYPKPHQ DRVDSIEGFE CIDTQRLESQ MSLDNAVDIV
HFLNMTPYSW KLTQEKKAQL ANEGLRCELD FHIAVYRRIA LA
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