Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2277 |
Symbol | |
ID | 4018769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2700884 |
End bp | 2701522 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956299 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_563280 |
Protein GI | 91793629 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000858541 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACT TAAGTGATAT TCGCCGCGAA TATACTAAGG GCGGTTTACG CCGTAAAGAC TTGCCAGACA ATCCTATGGC GCTGTTTGAA ACTTGGATGA CTCAGGCTAA AGAGGCCAAC TTAAGCGATC CTACCGCCAT GTGCGTGGCC ACTGTGGATG AAAATGGCCA ACCGTTTCAG CGCATTGTGT TATTAAAGCG TTTTGATGAC ACAGGGTTTG TGTTTTTCAC TAACCTTGAG AGTCGCAAAG CCAAGCAAAT AGCCATTAAT AAGCAGATAA GCCTGTTGTT CCCTTGGCAC CCTTTAGAGC GTCAAGTGGC AGTGTTAGGC GAGGCCGAAC CTTTGTCTAT GATGGAGGTG GCTAAGTATT TTATCAGTCG CCCAAAAGAC AGCCAAATAG CGGCCTGGGT ATCGAAACAA TCCAGTAAAA TCACCGCGAG ACAAGCCCTC GAAGGCAAGT TTAATGAGAT GAAAGCTAAA TTTGCTCAAG GTGAAGTGCC CATTCCTAAG TTTTGGGGCG GCTTTTTAGT GCGGCCTAAA AGCATAGAGT TTTGGCAGGG CGGTGAGCAC AGGCTTCACG ACAGATTCAT TTACACTAAA GCCGCCAGTG AATGGCAGAT AGACAGATTG GCGCCATAA
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Protein sequence | MSDLSDIRRE YTKGGLRRKD LPDNPMALFE TWMTQAKEAN LSDPTAMCVA TVDENGQPFQ RIVLLKRFDD TGFVFFTNLE SRKAKQIAIN KQISLLFPWH PLERQVAVLG EAEPLSMMEV AKYFISRPKD SQIAAWVSKQ SSKITARQAL EGKFNEMKAK FAQGEVPIPK FWGGFLVRPK SIEFWQGGEH RLHDRFIYTK AASEWQIDRL AP
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