| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2272 |
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| Symbol | |
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| ID | 4018764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2695240 |
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| End bp | 2698068 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956294 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_563275 |
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| Protein GI | 91793624 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000211243 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTA AAACCAGCCT AGCTGTGCTG ACGGCAACGG CGATTTCATC GCTCAGTCAT
GCAGCAGATA ATCCAATCAT CACAGAATAT GTGGAAGGCA GCAGTAATAA TAAAGCCATT
GAGCTTTACA ATCCTTCTGC TGCAAGTATC GATTTAAGTC AGTATCAGCT TAAATTCTTT
TTTAATGGCA GTACCACGGC CGGCAGTACA ATCGCGCTGG CGGGCACGTT AAATCCTGGC
GCGACCTATG TCATCGCCGA TGATGATGCC AGCCCAGAAA TTTTGGCTAA AGCCAATTTA
GCCAGCAATG CCAGCTTCTT CAATGGCGAC GATGCTATTG TGTTATATAA GCAGCAGCAA
GTGATTGATT CCTTAGGACA AGTGGGTGTG GACCCAGGTT CTGAGTGGGG TAGCGGAGAC
CTATCGACTC AAGACAACAC CATAAGAAGA AAGACCAACG CACTGACTCC CGATACTGTG
ATAGATGATG CGGTTAGCTT AGATAATTGG CTGGGTTTTG CCAAAGATGA CATCAGTGAT
TTAGGCCTGT TTGCTGCAGG ACCTGGGGAG CCAGACCCGA CCGAACCTGT TGAATTCGCC
TGTAATGAAC CGGCGTCAGC CATACACCTT ATTCAAGGGA CCACAAACAC AAGCCCATTA
AACGGCCAAA CCTTAGATGT TGAAGCTGTG GTGGTGAGTA ATCAAGAAGC GGGCCTTAAA
GGGCTGTTTC TGCAAATGCC TGATGGACAA GTCGATGCAG ACTCACTCAC TTCTGAAGGT
GTATTTGTCT ATACCGGCAA TGCCCCTATG GGTTATTTAG CCGGTGACAG TATACGCATT
CGTGCCAAAG TCAGTGAGTA TCAAGGTACC ACTCAATTAA CTCAAGTCAC TCACCATAGC
TTATGTGCAG CAGGTCAGCC TCTACCTACT GCCGCTGAAA TAACCTTGCC AGTGAACGAT
ATCGCTGAGC TTGAACGTTT TGAAGGCATG GCGGTGCACT TCAGTCAGCC TTTGGTGGTG
AATGAAGTTT ATAACCTTGG CCGTTATGGC GAAATCAGTT TAGGCAGCAG CCGTCATTTT
ATCGGTACCC AAGTGGCCGC CCCGGGCGCG GATGCGCTAG CAGTTACTGC GGCTAACTTA
CGCGATAGCA TATTGCTCGA TGATGGCCTA ACGGCGCAAA ATCCCGATCC TATTCGTTAC
CCAGCGCCTG AGCTTAGCGC CAGTAACAGC GTGCGAGTCG GTGATTTAGC CACAGACTTA
GCCGGTGTGA TGCACTATGG TTTCGGTAAA TACCGCATTA TGCCCACAGG AACTGTCAAC
TTTGTTGCCA ATAATCCTCG TACCTTGGCA CCAGACGCAG TAGATGCTGA CATGAAAGTG
GCAAGCTTCA ACGTGCTTAA CTACTTTAAT GGTGATGGCA TAGGTGGCGG TTTCCCAACG
GACAGGGGCG CTGACTCTGC CAGTGAATTT GCTCGTCAAA AAGCCAAGAT AGTTAGCGCT
ATGCAGGCTA TCGATGCCGA TGTTTATGGT TTAATGGAAA TCGAGAATGA CGGCTTTGGA
AGCAACAGCG CCATCGCTGA CTTGGTTAAT GGGCTAAACA GTGCCATAGG TGAACCAAGA
TACCAATACA TAGCGCTTGA TGGCCCAGGC ATAGGCACAG ATGCCATCAC TGTTGGCATG
GTCTATCGCG GCGATAAAGT CACCCCAGAA GGGGCGGCGC AGGTATTAAC CAGTGCTAAC
TCACCTTTAG ATGATAATGG CCAAGTGTTA TTTAATGACA CTAAAAACCG CCCTATGCTA
ACGCAAAATT TTGTCCATCA AGCTAGCGGT GAACAATTTG TGGTTGCGGT AAACCATTTG
AAATCCAAAG GCAGTAGCTG TGATGCCTTA GGGGATCCGG ATCTTAATGA TGGTCAAGCC
AACTGTAATG TGACTCGTAC TCGCGCGGCA ACGGCGGTAG CCCAGTGGTT AAATACTGTC
TACCCTGAGC AGCAAGTGTT AGTGATTGGT GACTTGAATG CTTACGCAAA AGAAGATCCT
ATTACGGCAT TGGAACAGGG CGGCTTTAGC GAATTGTTCC AGCATTTAGG TCACAGCAAT
GCCTATTCTT ATGTGTTCTC AGGAGAATCG GGTCAGCTGG ATCATGCATT AGCCAGTGCT
TCACTGCTTG ATAATGTGGT GGCGGCTCAA GAATGGCACA TCAATACCGA TGAGCCCACT
ATTCTTGATT ACAACGAAGA GTACAAGTCG GCAGCGCAAA TCGCCAATCT GTATCAAGGG
GATGCGTACC GTTCATCAGA TCACGACCCT GTGATAGTCA GCCTTAATTT TGCTCCGGCC
AATGTGGCGC CTGTTGCAAG CTTTGGCTAC CAAGCCAATG CAGGTCAGCT GAGCTTCACC
TCCACATCTA CCGATAGCGA CGGCGAAATC GTCAGTTACC AGTGGGACTT AGGTGATGGC
AGTGTGGCTC AAGGTCAAAC CTTAGTACAT GAGTATCAGC AAAGTGGCAA TTATGCTGTG
ACCTTAACCG TGACAGATAA CGGCGGCTTA AGCCACAGTA TGACCCAGAG CATTGAGGTC
AGCGTTGCAC CGCAAAATGC GCTGCCAATT GCGCAAATTT ACCACTTAAG ACTGTGGGTG
TTTGACTTGT TTTTCTCCTT CAGTTACGAC ACTGATGGTT ACATCAAGCA GCACAAATGG
CGCTTTAGCA ATGGTCAAAC CATGAAAGGC TTTTCTGCCA TTCAGCGTAA CCGCCGCGTC
ACGAGTGTTG AATTGACTGT GACGGATAAC GAAGGCGGCG AGGGCAGTAC CAGCCTGACT
TATCGTTAA
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| Protein sequence | MISKTSLAVL TATAISSLSH AADNPIITEY VEGSSNNKAI ELYNPSAASI DLSQYQLKFF
FNGSTTAGST IALAGTLNPG ATYVIADDDA SPEILAKANL ASNASFFNGD DAIVLYKQQQ
VIDSLGQVGV DPGSEWGSGD LSTQDNTIRR KTNALTPDTV IDDAVSLDNW LGFAKDDISD
LGLFAAGPGE PDPTEPVEFA CNEPASAIHL IQGTTNTSPL NGQTLDVEAV VVSNQEAGLK
GLFLQMPDGQ VDADSLTSEG VFVYTGNAPM GYLAGDSIRI RAKVSEYQGT TQLTQVTHHS
LCAAGQPLPT AAEITLPVND IAELERFEGM AVHFSQPLVV NEVYNLGRYG EISLGSSRHF
IGTQVAAPGA DALAVTAANL RDSILLDDGL TAQNPDPIRY PAPELSASNS VRVGDLATDL
AGVMHYGFGK YRIMPTGTVN FVANNPRTLA PDAVDADMKV ASFNVLNYFN GDGIGGGFPT
DRGADSASEF ARQKAKIVSA MQAIDADVYG LMEIENDGFG SNSAIADLVN GLNSAIGEPR
YQYIALDGPG IGTDAITVGM VYRGDKVTPE GAAQVLTSAN SPLDDNGQVL FNDTKNRPML
TQNFVHQASG EQFVVAVNHL KSKGSSCDAL GDPDLNDGQA NCNVTRTRAA TAVAQWLNTV
YPEQQVLVIG DLNAYAKEDP ITALEQGGFS ELFQHLGHSN AYSYVFSGES GQLDHALASA
SLLDNVVAAQ EWHINTDEPT ILDYNEEYKS AAQIANLYQG DAYRSSDHDP VIVSLNFAPA
NVAPVASFGY QANAGQLSFT STSTDSDGEI VSYQWDLGDG SVAQGQTLVH EYQQSGNYAV
TLTVTDNGGL SHSMTQSIEV SVAPQNALPI AQIYHLRLWV FDLFFSFSYD TDGYIKQHKW
RFSNGQTMKG FSAIQRNRRV TSVELTVTDN EGGEGSTSLT YR
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