Gene Sden_2260 details

Gene Information

• Locus tag: Sden_2260
• ID: 4018752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2682155
• End bp: 2682859
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637956282
• Product: putative lipoprotein
• Protein accession: YP_563263
• Protein GI: 91793612

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCGCA TTGGCACTCT TTTTATCTGC TTGATTATTA CGGCTTGCTC TTCGACCAAG 
GTTCATCTGT ATACCCATTA TTTGTCTGAT GAACAAGTTG CAGCGATCAG TGCCAAACTG 
GAAGCCAGTC ATTTTGAAGT GCAGACCAAT ACCTTGTCTT TCCCACAGAC GGTTGAAGAG 
TCCACAGTGA TTTATTCTCC ATTAATTCAA GACAAGTCGA GTATAGAAAG ACTAACCCAA 
GCATTGGCTG AGCTAGATTG GAAGGTATCA AGCGTGCAAC CCTTTGTTAA AGGTAATCAT 
TGGTACAAGC AGGATAGCGT CGGTTTGTTA TTGATCCCAG AGGGTATAAA ACAACAAGGT 
GAAATAGCCA GCCAAGACTT AGCTCATGAG TATGTCAGTA GAGATTGTGA TGCTTCGCAG 
TTGAATTCAG GGGTAAAAAT TCAATTAAAT CGAGATAACA CTTATCAGAT GGTCTTTACT 
CAGGACACAG CAGAAAGCAC AGATCACCTC AAAGGATTTT GGAAAATAAC CAGTTACCCT 
TATATGGAAC TATCATCACA AAATGAGCGC TGGTGGTTTT ATTTTGAAAT CGAACAAAAA 
CTAGAAACAG ACAAGGTGAG CAATATAGAC ATCATCGAGC TAAAACCTGC AGATAAGTAT 
AAATTCTTTC CAGATTGCCG CTTTGTTTTT GGCATCAGAG TGTAA 

 

Protein sequence

MYRIGTLFIC LIITACSSTK VHLYTHYLSD EQVAAISAKL EASHFEVQTN TLSFPQTVEE 
STVIYSPLIQ DKSSIERLTQ ALAELDWKVS SVQPFVKGNH WYKQDSVGLL LIPEGIKQQG 
EIASQDLAHE YVSRDCDASQ LNSGVKIQLN RDNTYQMVFT QDTAESTDHL KGFWKITSYP 
YMELSSQNER WWFYFEIEQK LETDKVSNID IIELKPADKY KFFPDCRFVF GIRV