| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2252 |
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| Symbol | |
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| ID | 4018744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2673578 |
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| End bp | 2674234 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637956274 |
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| Product | 3-oxoacid CoA-transferase, subunit B |
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| Protein accession | YP_563255 |
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| Protein GI | 91793604 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTAA CAAGAGAACA ACTGGCCCAG CGCGTTGCCA GAGAATTGCA AGACGGCTTT
TACGTCAACC TTGGCATAGG CATCCCCACC CTCGTGGCCA ATTACATTCC AGCTGGCATG
GAAGTCATGC TGCAGTCTGA AAACGGCCTA TTAGGCATGG GCGAGTTTCC AACCGAAGAA
ACAATCGATG CTGACCTGAT TAACGCTGGT AAGCAAACCG TGACTGCGGT CGCGGGCGCG
TCATTCTTCT CATCGGCAGA AAGCTTTGCC ATGATCCGTG GCGGTCATGT GGATTTAACT
GTGCTTGGCG CCTTTGAAGT GGACGTCGAT GGCTCTATCG CCTCATGGAT GATCCCAGGC
AAGCTCATCA AGGGCATGGG TGGCGCCATG GATTTAGTCG CCGGCGCTGA CAATATTATT
GTCACCATGA TGCACGCCGA CAAACACGGC AATTCAAAAC TACTGCCAAA GTGCGAGCTG
CCCTTAACCG GTTTTGGCTG CATCAAACGA GTCATGACAG ATTTAGCCTT TATGGAAATC
AAAGACGGCG CCTTCCATCT GCTAGAGCGC GCCCCAGGGG TGTCGGTTGA TGAGATCATC
GCCAAGACCG CCGGCAAACT TGTGGTCCCA GCCCATGTGC CAGAAATGAC ATTTTAA
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| Protein sequence | MALTREQLAQ RVARELQDGF YVNLGIGIPT LVANYIPAGM EVMLQSENGL LGMGEFPTEE
TIDADLINAG KQTVTAVAGA SFFSSAESFA MIRGGHVDLT VLGAFEVDVD GSIASWMIPG
KLIKGMGGAM DLVAGADNII VTMMHADKHG NSKLLPKCEL PLTGFGCIKR VMTDLAFMEI
KDGAFHLLER APGVSVDEII AKTAGKLVVP AHVPEMTF
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