| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2250 |
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| Symbol | |
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| ID | 4018742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2671869 |
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| End bp | 2672756 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956272 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_563253 |
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| Protein GI | 91793602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCAA CTAACGTCAG TATCTTCGAG GTGGGCGCCC GCGATGGCTT GCAAAATGAA
GTCAGCGTGC CAACCGAGGC GAAAATTGCC TTGATTGAGC AGCTGGCAGA CGCTGGCGTT
AAGCGCATCG AGGCGGCAAG TTTTGTGTCG CCTAAATGGG TGCCACAAAT GGCGGACTCT
AGTGCTGTGC TTCATGGCAT TAAGCGTCAG CAAGGCGTGG TATACAGCGC CTTGACCCCA
AACCTTAAGG GGCTCGAACT TGCGATTGCA GCAGGTGCCG ATGAGGTGGC AATATTTGGT
GCCGCCTCTC AAAGCTTTAG CCAGAAGAAC ATTAACTGCT CCATCGAGGA GTCTATCGAG
CGCTTTATCC CCTTGATGGA TATGGCAAAA CAGAGGAATA TCGCCGTGCG CGGTTATGTG
TCCTGTGTGC TCGGCTGCCC CTATAAAGGT GAGATAAAGG CCTCGGAAGT GGCCCGCGTG
TCTGAAATCC TTTACAAAAT GGGCTGTTAT GAAATATCTC TGGGTGACAC CATAGGCATT
GGCACAGCCA ATAATGCCCG TAGAATGCTG GAAACCGTGG CAGAACTTGT GCCCATAGAC
AAATTAGCGC TGCATTTTCA TGACACTTAT GGTCAGGCCC TTGCCAATAT TCAAGCTTGC
CTGCCCACAG GAATAAGCGT ATTTGACTCA TCGGTTGCAG GTCTTGGGGG TTGCCCCTAC
GCTAAAGGCG CCTCTGGCAA CTTGGCCAGC GAAGATCTCA TCTATATGCT CCACGGCATG
GGCATAGACA CAGGCATAGA CTTAACTAAG CTTATTCAGG CTGGCAAGAA TATCAGTCAG
GCTTTAGGCC GCATGAGCGC CTCAAAAGTG GCTAACGCGC TGGGATAA
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| Protein sequence | MLPTNVSIFE VGARDGLQNE VSVPTEAKIA LIEQLADAGV KRIEAASFVS PKWVPQMADS
SAVLHGIKRQ QGVVYSALTP NLKGLELAIA AGADEVAIFG AASQSFSQKN INCSIEESIE
RFIPLMDMAK QRNIAVRGYV SCVLGCPYKG EIKASEVARV SEILYKMGCY EISLGDTIGI
GTANNARRML ETVAELVPID KLALHFHDTY GQALANIQAC LPTGISVFDS SVAGLGGCPY
AKGASGNLAS EDLIYMLHGM GIDTGIDLTK LIQAGKNISQ ALGRMSASKV ANALG
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