Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2241 |
Symbol | |
ID | 4018733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2662326 |
End bp | 2663255 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637956263 |
Product | LysR, substrate-binding |
Protein accession | YP_563244 |
Protein GI | 91793593 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG GGATGAGTAA GTTAGATTTA AATTTATTGG TGATATTCGA TGCCATCATG AAAGAGCAAT CCATCAGCGC TGCGGCCGAG CAATTAGCCA TGACTCAGCC CTCAGTCTCT AATGCCGTCG CTAGGATGCG TCACAATTGG AAAGATCCGT TATTCATTAA ACAAGGACGC GGCATTAAGC CTTCACCCTT CGCCCTTGCG CTTTGGCAGC AGGTGGCTTC GCCCCTTGAG CAAATTCGCT CGGCGGTGTC ATCAAAGACT TTTAATGCCG CCCACAGTGA GCGTACCTTT CGCATCGCCA TTACCGATGG CACATCGGGA TTATTTTGGC CTGCCCTGAG GCGCCATTTA GAGCGACATG CCCCCAAGAT AAATCTGCAC GCCGTGCCTT ATAAACTCGA TGGCGAAGCC CTATTGGTGA ATGCAGAGGT GGATTTGGTG CTGGATTATT ATGAAAACCG CCATCCACAG ATCCTGAGCC AACATTTATT CGATAACCAG TTTGTCTGCG TGATGGCAAA AGCCCATGCC TTAAGCGAAA AAACGCTGAC CTTGGATGAC TTTGCGGCAG CAGAGCATTT ATTGGTCTCC CTTTCTGGTG ATGCCAGTGG CACAGTGGAT AGAAAACTCG CTCAACTTGG CCATAGTCGG CGAATTGCCA TGACAGTCAA TAGTTTTGCC AGTGCAAAAA CCTTGATAGA AGAGAGCAGG TTAATCAGCA CTTTGCCTTA TTCCATCATA GCGAGCTGGC AATCTCTGGA TAAACTTACA GTGAAAACCT TGCCTTTCAC TGTGCCTAGC GTGCCCATCA GCATGGCATG GCACAGCAGA AATGACGCCT CCATTAGCCT GCGCTGGCTC AGGGAGGCAA TAGTCGACAT AGTGAAGACA CAGCCACAAC GCTTTAACAA TGAAAACTAA
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Protein sequence | MSAGMSKLDL NLLVIFDAIM KEQSISAAAE QLAMTQPSVS NAVARMRHNW KDPLFIKQGR GIKPSPFALA LWQQVASPLE QIRSAVSSKT FNAAHSERTF RIAITDGTSG LFWPALRRHL ERHAPKINLH AVPYKLDGEA LLVNAEVDLV LDYYENRHPQ ILSQHLFDNQ FVCVMAKAHA LSEKTLTLDD FAAAEHLLVS LSGDASGTVD RKLAQLGHSR RIAMTVNSFA SAKTLIEESR LISTLPYSII ASWQSLDKLT VKTLPFTVPS VPISMAWHSR NDASISLRWL REAIVDIVKT QPQRFNNEN
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