Gene Sden_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2232 
Symbol 
ID4018724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp2653065 
End bp2653658 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID637956254 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_563235 
Protein GI91793584 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.888389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA TACTCGCCAT CACCTTGTTT GCCTTTTCAT CTGGCATAAC CCCAGGGCCA 
AACAACATCA TGTTGATGAC TTCAGGGGTG AATTTTGGCA TCAAGCCTTC ATTACCTCAT 
TTAGCTGGTA TATGTTTAGG TTTCCCTTGC ATGGTTTTAG CCATAGGACT GGGTCTGAGC 
TCAGTGTTTC AAGCCTACCC GGTATTGCAC CTCATCATTA AAGTACTGGG GGTGAGTTAT 
CTGCTGTATT TGTCTTGGTT AATCGCCAGA AGCAGTAACA AGATGGAAGG GAAACAATTG 
AGCCAACCCT TTAGTTTTAT TCAGGCGGCG GCGTTTCAAT GGGTGAATCC TAAGGGATGG 
ATCATGGCGG TCGGTGCCAT TGCCACCTTT ACCGTACAAA CGGCGGATAT GACACCACAA 
GTCTTGACCA TAGCGACTGT GTTCTTATGT GTCGCCTTTC CTTGCGCCAT GGTGTGGCTC 
ACTTTTGGTG TGGCACTCAA GCGATTATTA AAAAACCAGC GTCAACAAAA AATATTCAAT 
ATTACCATGG CGTTACTGCT AGTCGCCTCC ATCTTGCCTA TGATAGGGGC TTGA
 
Protein sequence
MELILAITLF AFSSGITPGP NNIMLMTSGV NFGIKPSLPH LAGICLGFPC MVLAIGLGLS 
SVFQAYPVLH LIIKVLGVSY LLYLSWLIAR SSNKMEGKQL SQPFSFIQAA AFQWVNPKGW 
IMAVGAIATF TVQTADMTPQ VLTIATVFLC VAFPCAMVWL TFGVALKRLL KNQRQQKIFN 
ITMALLLVAS ILPMIGA