| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2228 |
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| Symbol | |
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| ID | 4018720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2646613 |
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| End bp | 2649879 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956250 |
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| Product | SNF2-related |
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| Protein accession | YP_563231 |
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| Protein GI | 91793580 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCTA AAATTTTTAA TCTGCCAATC AAGATGACCT CAGCCTTAGT GGCTAAGTTG
TTCCCTGCCA ATGTGTTACA AAAAGCACAG AATTACGTGA TCCAAGGTCG GGTACTGGAT
GTGACTGCCA GTAGCGACAA TCATAATATT GAATCCTTTG TGGCTGGCAG TCACCCAGAG
CCTTATCGTC AAGACATCAC CTTAGTGAAC ATTAATCATA AAATTTTGAT GAATGCTCAT
TGCACCTGTC CCGTGAGAAG CAATTGTAAA CATGTGGCGG CGGCGTTATT AACCTTAGTG
GATAAAAAGC CAGTAGAAGA GCAGCGCTTA TCTCAATGGT TGATGCAACT GGATGAACAA
GCCACTTCAG GTAGCGCAGA TGAGTTGCCC GAGCAAGAAA AGGACCGCGT GATTTTCGTG
TTGTCGAGCG ATCATCAAGG GGTATTTGTT GAGCTTAAAA GAAGCAAGCT CAACAAGAAA
GGCCAGTTTA ATCGAGGCAG TAAACTGGCA CTCACCGAAG TGAAATATCA TATTCCTTGG
TGGATATCCA AGGAAGATGC GCAAATTGTC AGCTTACTGA TGTCAGTGCT GGCGGCTAAT
CATCATGCCT CTAAAATTTA CCTTGAAGGT GAGATTTGTG CCCTGGCACT CAATAAAATG
CTCAATCTGG ATACCTGTTT CTGGGAAGAT AGCCGTTTCC CTATCATGCG AACACAAGCC
ATCACCCCTG AGTTTATTTG GCTTGAGTTG GATAGAAAAC ACACCCAAAT GCAAATGCAG
TTGCCAACAC TGGAAAACTG GGAATTTATC GCCACTGTGC CGCCCATGTT TGTGGATTTA
GACTACTTAC GAATTGGTTT ACTAGACACT GAACTCACCA CAGCCAAGCT TAAATTACTG
CAACAGATGC CGCCTGTGCC ACTGACTCAA GTGGACAGTA TTAGTCACAA AATGCTGCAG
CATTTCTCGC CGCGCAATGT GCCTGTGCCT GCCGATATTG AGTTTCATGA AGTCGATAGC
CCGCTGAAGG TGCGCCTTAC TTTAACTATG GTCAAATTGT CTGATGCCAT GGGCGCTGGC
AAGCAGCCGG CATTAAGGCT TGAATTTCTC TATGGGGAGA TCTGCTTTAG CGGTAAGGCA
AAGCGTGAAG CCATCAGCTT AATTAAAAAA GATAAGGTGC AGTATCAAGT CAAGCGAGAT
TTGGAGGGCG AAACCCGCGC CGCCGATGCG TTATCGACGC TCAAGTTTAG CTTCCTAAAC
CCTTTAGATG TCGCAAGCAG TGAAACATTG CACTGTTTTG CTACTTTGGG CATCTTGCCT
GATGCCATCT ATGCCTGGTC GCAGTTTGTA AACACTCAAG ATGCCGTAGA CAATGACAGT
GCGAGCACTA AGCAAGCGTT AACTAAGCTA GGTTATGAGT TGATTGAGGC CGAGGATTTT
GACCTTAATA TTGTCGCCGC GGAACTAGAT ATCGATCTTA ATGACGATGA AGATAATGGC
TGGTTTTCGT TGTCGTTAAA TGCCGATATC GATGGCCAGA GTGTGCCCTT GTTAGCCTTA
GTGGCACGCT GGCTGCAACA ACATGGGGAG CCAGATGATG AGCAGTTCCT GTTGCTGCCA
TCCCCTAATG GGGGCTTTAT TCAAGTCAAA GCCAAAACCA TTAAACCCTT AGTGTCCATT
ATTAAGGAAC TGTTTGACCG TCACGGCGAA GATAAGCTGC AAGTGCCTCG CAGTCGAGCT
CATTTGCTCA ATGAATTAAC CGCCAGCGAA ATTCGCCTGC TTAATGGCGA GCGGATCCAA
GCATTGGCGG CCAAGCTCGG TGAGTTTAAA GGCATAGTGT CGGTGAGCTT GCCTGCGGGC
CTTAATGCCA CCTTAAGGGA TTATCAGAAA CAAGGGCTGG ACTGGTTATG CTTCTTAAAA
GAGTATCAGC TTGGCGGTAT ATTGGCCGAT GATATGGGCC TAGGTAAAAC CATTCAGACC
TTGGCATTTT TACTAAAGGC GAAAGAACAG CGCGGCGACA AAACGGCTAA AACCAGCCTT
ATCATCTGTC CAACTAGCTT GATTGGCAAC TGGTTAAAAG AGACCCAAAA GTTTGCCCCA
AGCCTTAAGG TATTGGTGAT ACATGGTAAT AAACGCAAAG ACTTGTTGGC GCAAATTGAG
CAGCATGACT TAGTGATCAC CACCTATCCG CTTATCTTGC GGGACGAGCT TATCTATAGT
CAGATCCATT TTGAACACCT TATTTTAGAT GAAGCTCAGC TGATTAAAAA TGCCCAGGCC
AAGGTGACTC AGTTGGTTAA AACTTTGCGG GGCCGTTTTC GCTTGTGCCT GTCGGGTACC
CCCCTTGAAA ACCACTTAGG CGAGCTCAAA TCCTTGATGG ACTTTTGTTT GCCAGGTCTC
TTAGGTCAAC ATACGCACTT TTTAAAAGAA TTTAGAAATC CAATAGAAAA ACAAGCGGAT
AAAGAGAAGT TAATTCAGCT TTCTACGCGA ATTTCCCCCT TTATGCTGCG CCGTACTAAG
CAAGAAGTGG CCGCGGAATT ACCGGAGAAA ACTGAGATTA TCTCTTCACT CACCTTGGAG
AAAGATCAGC GTAACTTGTA TGAAAGTATT CGTTTAGTGA TGGAGAAAAA ACTGCGGGAA
TTGTTCGCCC AAAAAGGCGT GTCTAGCAGT CATATCGAGT TTTTAGACGC CTTGCTTAAA
TTGCGCCAAG CCTGCTGCGA TCCTCGTCTG GTGAAGCTTG AACAAGCGCA AAACGTTAAG
AGTAACGCCA AGCTTACCTG GCTTACGGAA AACTTAACTG AAATGGTGGA AGAGGGGCGT
AAAATCCTTA TTTTCAGTCA GTTCACTGGC ATGTTATCCC TAATCGAAGA AGAGCTGCAA
CGCCTCAATA TTGACTACAG TTTGCTGACT GGTAAGACTC GCTCAAGGCA AACACAGATA
GATGACTTCC AGGAAGGCCG TAAGCCTGTG TTCCTAATCA GCCTAAAAGC GGGTGGCACT
GGGCTTAACT TAACGACCGC AGACACAGTA ATCCATTTCG ATCCTTGGTG GAACCCAGCC
GCCGAACGCC AAGCCACAGA CAGAGCCCAC AGAATTGGAC AACTGAACCC AGTATTTGTC
TATAAATTGA TAGCCCAAGG CACGGTGGAA GAAAAAATCC ATGAGATGCA GCAGCATAAG
CAGGGCCTTG CGGACAGCAT CTTGTCAGAC AAAGAGCAAG GCCCATGGCA GGGAAGTGCA
GAAGACTTGT TAGCCCTGCT AAGTTAA
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| Protein sequence | MSAKIFNLPI KMTSALVAKL FPANVLQKAQ NYVIQGRVLD VTASSDNHNI ESFVAGSHPE
PYRQDITLVN INHKILMNAH CTCPVRSNCK HVAAALLTLV DKKPVEEQRL SQWLMQLDEQ
ATSGSADELP EQEKDRVIFV LSSDHQGVFV ELKRSKLNKK GQFNRGSKLA LTEVKYHIPW
WISKEDAQIV SLLMSVLAAN HHASKIYLEG EICALALNKM LNLDTCFWED SRFPIMRTQA
ITPEFIWLEL DRKHTQMQMQ LPTLENWEFI ATVPPMFVDL DYLRIGLLDT ELTTAKLKLL
QQMPPVPLTQ VDSISHKMLQ HFSPRNVPVP ADIEFHEVDS PLKVRLTLTM VKLSDAMGAG
KQPALRLEFL YGEICFSGKA KREAISLIKK DKVQYQVKRD LEGETRAADA LSTLKFSFLN
PLDVASSETL HCFATLGILP DAIYAWSQFV NTQDAVDNDS ASTKQALTKL GYELIEAEDF
DLNIVAAELD IDLNDDEDNG WFSLSLNADI DGQSVPLLAL VARWLQQHGE PDDEQFLLLP
SPNGGFIQVK AKTIKPLVSI IKELFDRHGE DKLQVPRSRA HLLNELTASE IRLLNGERIQ
ALAAKLGEFK GIVSVSLPAG LNATLRDYQK QGLDWLCFLK EYQLGGILAD DMGLGKTIQT
LAFLLKAKEQ RGDKTAKTSL IICPTSLIGN WLKETQKFAP SLKVLVIHGN KRKDLLAQIE
QHDLVITTYP LILRDELIYS QIHFEHLILD EAQLIKNAQA KVTQLVKTLR GRFRLCLSGT
PLENHLGELK SLMDFCLPGL LGQHTHFLKE FRNPIEKQAD KEKLIQLSTR ISPFMLRRTK
QEVAAELPEK TEIISSLTLE KDQRNLYESI RLVMEKKLRE LFAQKGVSSS HIEFLDALLK
LRQACCDPRL VKLEQAQNVK SNAKLTWLTE NLTEMVEEGR KILIFSQFTG MLSLIEEELQ
RLNIDYSLLT GKTRSRQTQI DDFQEGRKPV FLISLKAGGT GLNLTTADTV IHFDPWWNPA
AERQATDRAH RIGQLNPVFV YKLIAQGTVE EKIHEMQQHK QGLADSILSD KEQGPWQGSA
EDLLALLS
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