| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2223 |
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| Symbol | |
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| ID | 4018715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2640372 |
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| End bp | 2642648 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956245 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_563226 |
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| Protein GI | 91793575 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT TTACAGCAGT GGAAAATGTA AGCCGCCGAG ATGTACTTAA GTTGTTTGGC
GCCGTGGGAG GAGGCCTTGC ATTAGGGGTT AGTGGCCTAA GCTGGAGCCC GATGGCGTTG
GCTCAAGATA AACAGGCGGC GCTGAATCTT TTTATCGCCA TAGGCGAAGA TAACAAGGTG
TATTTAACCT GTCATCGCTC GGAAATGGGT CAGGGCATTC GCACCGGTAT TCCCCAAGTG
CTTGCGGATG AACTGGAAGC CGATTGGGAC AAAATAATCG TAGTGCAAGG GCTTGCCGAT
AAGCGCTATG GCAGTCAAAA CACAGACGGT AGCCGCTCTA TTCGCAAGCA TTTTCATAGA
ATGCGTCAAA TGGGCGCGAT GGCGCGCACC ATGCTAGAAC AAGCCGCCGC CAATCAGTGG
CAGGTGGCTA TAGAACAGGT TAAAGCTAAG GGCCATAGAG TCTATTTATT AGTAGATGCG
GCTACAGGGG CAGACATTGA AAGCCTTGGC GGCAAGAGCT TAAGTTATGG TGAACTTGCC
ATAGCCGCAT CTACCTTGGC CATGCCAGAT GCCGATAGCG TGCGACTCAA GCCTGCCAGT
GAATTTACTC ATATAGGTAA GTCGCACACC ATAGTCGACA TGGACGCTAT GATCGAAGGT
AAAGCCGTGT ATGGCTATGA TATTCGTATG CATGGTTTGA TGCATGCCAG TATCAGCCGC
CCGCCCGTGC TTGGCAGTGA TGTGGCAAGT TTAGATGACA GTGAGGCACG TAAAATTGCT
GGAGTGGTGG ACATAGTCCG CTTAGCGGTG CCAAAAGGTG CCCCCTTGTT TCATCCCTTA
GGCGGGGTGG CAGTGATTGC GACCAATACT TGGAGCGCCA TCGAAGGGCG CAAAGCCCTA
AAAATCACTT GGACACAAGC CCCAAACGAC GGTCATGATT CAGATGCCTA TCTTGCAGAG
TTGGTGACGC GCGTGGGGCA GCCGGGTAAA ACCCTGCGCC ATATTGGCCC CGAAACCACG
GACTGGCCAG AGACACAGAC TCATAAAGCC GTGTATACCT TACCCTATCT GACCCATGCC
ATGATGGAGC CGCCAGTGGC TACGGCCAAG GTCAGCAGCA AAGCCTGCGA GCTCTGGTCA
TCGACTCAGA CACCACAAAG TACTCAGCAA AATGTGGCTG CAGCCCTTGG CTTTGAAGAA
CAGCAAGTCA AGGTCAATGT GACCTTATTG GGCGGCGGGT TTGGGCGTAA ATCTAAACCC
GACTTTAGCG TCGAGGCGGC AGTGTTATCC CAAAAACTTA AGCGTCCAGT GAAGGTGTGT
TGGAGCCGAG AAGATGAAAT TCAGAACGGC TATTATCACG CCATCAGTGC CCAGTTATAT
CAGGCCAAAT TCGACAAGGA CAATAAGCTG GTGGCCTTTC TTGCCCGCAG TGGTTTCCCC
TCTATTAGCT CAACCTTTGC CGAAGGGGTG GATGAGCCTT CAGCGGGCGA GCTGGATTTA
GGCTTTACCG ACGTGCCCTT GGCGGTGGAA AGCCTACGTT TAGAGTCGGT TAAGGCCAAG
GCCCATACCC GCATTGGTTG GATGCGCTCT GTGTGTAATA TTCAGCACGC CTTTGGTATT
GGCAGTTTCG TCGATGAGCT GGCCCTAAAA GCCAAGCTGC CTTGCATCGA GATGTGGCGT
CAGTTGCTCG GATCTGCGCG GATAGAGACC TTTAAGGATC AAGGGTTTGA ATACAGTAAT
TACGGTGAGG AACAAGCGGA TCACCCCATA GATGTTGGCC GTTATCACAG ATTGCTCGAT
GATATGCAGG CCAAGCTTAA GCTTGAACCT GCGCTTAAGG CGAACCAAGG GTGGGGCTTT
GCTATTCACA GAAGTTTCGT CAGTTACGTG GCGGTGGCGA CCTTAGTCGA AGTTAACGAT
AAGCAGCTTA AGGTGCTTAA GTGCATCGCC ATGATAGATG CAGGTTTGGT GGTGAACCCA
GATAGGGTTA AGTCTCAGAC AGAAGGGGCG ATGATTTTTG GCTTAAGCCT TGCCATGATG
GGGGAGATAA GCTTTAAAGA GGGCAAAGTG GTGCAATCCA ATTTCCATGA TTATCCTGTG
CTGCGTCTAT CTCAAAGCCC CGAGATCAGT GTGACTTTGA TTGAGTCGGA TGCGAAACCT
GCCGGTGTGG GTGAGCCTGG GGTGCCGCCA GTGGCACCGA GTTTGACCAA TGCCATCTAT
GCCGCCTGCG GTATTCGGGT GCGGGACTTA CCCGTCAGCA AAGAGTTCAC GGTTTAA
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| Protein sequence | MTQFTAVENV SRRDVLKLFG AVGGGLALGV SGLSWSPMAL AQDKQAALNL FIAIGEDNKV
YLTCHRSEMG QGIRTGIPQV LADELEADWD KIIVVQGLAD KRYGSQNTDG SRSIRKHFHR
MRQMGAMART MLEQAAANQW QVAIEQVKAK GHRVYLLVDA ATGADIESLG GKSLSYGELA
IAASTLAMPD ADSVRLKPAS EFTHIGKSHT IVDMDAMIEG KAVYGYDIRM HGLMHASISR
PPVLGSDVAS LDDSEARKIA GVVDIVRLAV PKGAPLFHPL GGVAVIATNT WSAIEGRKAL
KITWTQAPND GHDSDAYLAE LVTRVGQPGK TLRHIGPETT DWPETQTHKA VYTLPYLTHA
MMEPPVATAK VSSKACELWS STQTPQSTQQ NVAAALGFEE QQVKVNVTLL GGGFGRKSKP
DFSVEAAVLS QKLKRPVKVC WSREDEIQNG YYHAISAQLY QAKFDKDNKL VAFLARSGFP
SISSTFAEGV DEPSAGELDL GFTDVPLAVE SLRLESVKAK AHTRIGWMRS VCNIQHAFGI
GSFVDELALK AKLPCIEMWR QLLGSARIET FKDQGFEYSN YGEEQADHPI DVGRYHRLLD
DMQAKLKLEP ALKANQGWGF AIHRSFVSYV AVATLVEVND KQLKVLKCIA MIDAGLVVNP
DRVKSQTEGA MIFGLSLAMM GEISFKEGKV VQSNFHDYPV LRLSQSPEIS VTLIESDAKP
AGVGEPGVPP VAPSLTNAIY AACGIRVRDL PVSKEFTV
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