Gene Sden_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2218 
Symbol 
ID4018710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2633164 
End bp2634615 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content46% 
IMG OID637956240 
Productperiplasmic copper-binding 
Protein accessionYP_563221 
Protein GI91793570 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3420] Nitrous oxidase accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCTA GCTCATTCTT TGGTTTTTCA CTTTCTCGAA GAGCAAGCGT ACTGCTTGCT 
AACGCACTGT TATTGCCATT GTTATTAGCA CTGCTATCGC CACTGGCCTT TGCCGCCATT
ATTGACGTAA CCCCAGCGGA TAACCTGCAA ACCACACTAA ATAACGCCCA AGATGGTGAT
GAACTCATCT TAGCTAAAGG CATATACCAA GGTAATTTTG TGGTACCCCG AAGCGTCACA
CTCAAAGGCA ATGGTGAGGC GGTTATTGAT GCCAACGGCA AGGGCCACGC CTTACTGCTG
ACCAATTCTC ACATCACAGT GGATGGACTT AACATTCAAA ACTGGGGACA AGATTTAACC
GCCCAAGACT CAGGCATTTA TTCAGACAAA CAAGCCAGCC ATATCGTGCT CAGCAATAAT
CACTTGCAAG GTAGTGGCTT TGGTATTTGG CTGCAAAAAG GCCAGCATAT TAAGGTGCTG
GGCAATACCG TAATAGGCAA TGAGGCGCTT CGCTCATCAG ACAGAGGTAA CGGCATACAG
CTTTCCATCG TGCAAAACGT GCTGGTAAAA GGCAATGATG TTAGCGGCAC CCGTGACGGG
ATTTACATTA TTTCTAGTCA ACATAATGTG ATAGAAAACA ATATAATGCA TAACCTTCGC
TACGGGGTGC ATTATATGTA TTCTCACAGC AATAAGGTGA TGAATAACAG CGCTTATGAT
ACTCGCGCTG GTTATGCCTT AATGAGTTCA CGCCTACTTA CCGTAACGGG CAATCGAAGC
GATAACAGCG AAGATTACGG CTTTTTATTG AATTTTATTA CCTCATCCAC CATCAGCCAT
AACCGCATCA CCAATGTGTG GACCAAGCCT GAAAACAAGG TCTTAGGCCG CGATGGTAAG
GGCTTATTTG TCTACAACAG TGCTTACAAC ACCCTAAGTC ATAATTTAGT GAAAACCGCT
GAAATTGGCA TACACCTCAC CGCTGGCTCT GAAAATACCA AAGTCTTTGC CAATAGCTTT
ATTAACAATC CTTTGCAGGT GAAATACGTG GCCAATCGCG AAGAAGAGTG GAGCCTTGAT
GGGGTGGGTA ATTACTGGAG TAACTACCTT GGCTGGGATC TTAATAATGA CGCCAGAGGC
GATACCCCCT TTGAGCCCAA TGATGGCATA GACAAGCTAG TATGGCAGTA CCCAGAGGCG
AAAATTTTGC TTGATAGCCC CGCCATTTTA ATGCTGCGCT GGGTGCAAGA CCAATTCCCT
GTGCTTAAGC CTGCTGGGGT AAAAGACAGC TTCCCTTTGA TGCAGCCAAT CGTACTTTCA
CAAGCTGAAT TTGCCTCTGC GCAAGAAAAA TTAGTGCACT CTGAAGAATT AGCACCGTCT
CAGTTAGCAG TGCCGTTAAA TGCCCAAGAA CCTCATTTAG TGTCAGTTAC CGTTTCAGGT
GGAACCCTAT GA
 
Protein sequence
MMPSSFFGFS LSRRASVLLA NALLLPLLLA LLSPLAFAAI IDVTPADNLQ TTLNNAQDGD 
ELILAKGIYQ GNFVVPRSVT LKGNGEAVID ANGKGHALLL TNSHITVDGL NIQNWGQDLT
AQDSGIYSDK QASHIVLSNN HLQGSGFGIW LQKGQHIKVL GNTVIGNEAL RSSDRGNGIQ
LSIVQNVLVK GNDVSGTRDG IYIISSQHNV IENNIMHNLR YGVHYMYSHS NKVMNNSAYD
TRAGYALMSS RLLTVTGNRS DNSEDYGFLL NFITSSTISH NRITNVWTKP ENKVLGRDGK
GLFVYNSAYN TLSHNLVKTA EIGIHLTAGS ENTKVFANSF INNPLQVKYV ANREEEWSLD
GVGNYWSNYL GWDLNNDARG DTPFEPNDGI DKLVWQYPEA KILLDSPAIL MLRWVQDQFP
VLKPAGVKDS FPLMQPIVLS QAEFASAQEK LVHSEELAPS QLAVPLNAQE PHLVSVTVSG
GTL