| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2198 |
|---|
| Symbol | lpxK |
|---|
| ID | 4018690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2608499 |
|---|
| End bp | 2609494 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637956221 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_563202 |
|---|
| Protein GI | 91793551 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCT GGATAAATAA TATTTGGTAT GGCTCAAATC CCATTAAATG GCTACTAGTG
CCGTTATCTG GCTTATTTTG GTTGATTTCG AGTCTGAGAC GGAAAAAGTT TGCTGGCAGC
CCATCGGCAT CAGAAGCCTT AGGGGTGCCA GTTATCATAG TCGGTAACAT TACCGTGGGT
GGCAGTGGCA AAACACCTAT GGTCATCTAT CTCATTGAAC TGCTTCGGCG CCAAGGCTAT
CGCCCAGGGG TGATTAGCCG CGGTTATGGG GTAAAAATAG ACGGGGTTAA GCTGGTTGAA
GCACAGGCGA GCGCTGTGGA TGTCGGTGAT GAGCCCGCCA TGATAGTGGC CCGCACTCAA
GTGCCCATGG CTGTGGGACC TGACAGGCTT GCCGCGGTGA GCTTATTGCA ACGCCATTAT
GATATCGATG TCATTATCAG CGATGATGGC CTGCAGCATT ACAAATTAAC TCGAGATATA
GAGCTTGTTA TCATAGATGG CGCTCGGCGT TTTGGTAATG GTTATCTGTT ACCCGCAGGG
CCATTACGGG AAGGATTATG GCGGTTAAAG ACCATAGATT GGCTGATTAA TAATGGGGGG
AAGGCCCAAG ACAATGAGGT GTTGATGCAG CTGGAACCTA AGCCCTTGTT GAAGGTTAAA
TCGAGTCAGC CTGGATTGGA AAGCCTAGAT AAAGCACTGC CCGTGGTGGC TATGGCCGGC
ATAGGTAATC CAGCGCGATT TTTTGACTCA CTTAGCGGCC AAGGGTATCA GCTAAAGCAC
ACCTTAGCAT TTGATGATCA TCAGGCATTC GATGCTCAAG CACTCATTGC ATTGGCGGGG
GACTTGCCGC TTATTATGAC GGAAAAAGAT GCCATCAAGT GCCGCGACTT TGCTCAAGAT
AATTGGTGGT ATTTACCGGT TAATGCGAGA CTTAACGCAG ATTTTGATAA GGCATTGTTG
GCCCGTTTAG CGCCATTAGT GCAGATAAAA CCATAA
|
|---|
| Protein sequence | MQRWINNIWY GSNPIKWLLV PLSGLFWLIS SLRRKKFAGS PSASEALGVP VIIVGNITVG
GSGKTPMVIY LIELLRRQGY RPGVISRGYG VKIDGVKLVE AQASAVDVGD EPAMIVARTQ
VPMAVGPDRL AAVSLLQRHY DIDVIISDDG LQHYKLTRDI ELVIIDGARR FGNGYLLPAG
PLREGLWRLK TIDWLINNGG KAQDNEVLMQ LEPKPLLKVK SSQPGLESLD KALPVVAMAG
IGNPARFFDS LSGQGYQLKH TLAFDDHQAF DAQALIALAG DLPLIMTEKD AIKCRDFAQD
NWWYLPVNAR LNADFDKALL ARLAPLVQIK P
|
|---|
| |